RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 F2P00734 622 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 FOSP01100 380 aaPredicted RBP10.16□□□□□ -0.78
LDB1-203ENST00000461873 THPOP40225 353 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 PBX2P40425 430 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 METAP2P50579 478 aaKnown RBP eCLIP10.16□□□□□ -0.78
LDB1-203ENST00000461873 ADCY7P51828 1080 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 MTMR1Q13613 665 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 GRIN2CQ14957 1233 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 HSDL1Q3SXM5 330 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 TMTC3Q6ZXV5 915 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 RSPH3Q86UC2 560 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 SGMS1Q86VZ5 419 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 ZNF713Q8N859 430 aaPredicted RBP10.16□□□□□ -0.78
LDB1-203ENST00000461873 PHOSPHO2Q8TCD6 241 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 SYMPKQ92797 1274 aaKnown RBP10.16□□□□□ -0.78
LDB1-203ENST00000461873 GLG1Q92896 1179 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 SENP7Q9BQF6 1050 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 SDF4Q9BRK5 362 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 AZI2Q9H6S1 392 aa10.16□□□□□ -0.78
LDB1-203ENST00000461873 CXXC1Q9P0U4 656 aaPredicted RBP10.16□□□□□ -0.78
LDB1-203ENST00000461873 MYO9BQ13459 2157 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 hCG_1642624A0A1W2PR95 340 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 SPATA31C2B4DYI2 1134 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 MAFGO15525 162 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 TLL1O43897 1013 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 LGALS2P05162 132 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 CKBP12277 381 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 ICAM3P32942 547 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 RABGGTBP53611 331 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 SKIV2LQ15477 1246 aaKnown RBP10.15□□□□□ -0.78
LDB1-203ENST00000461873 RASIP1Q5U651 963 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 ERICH6BQ5W0A0 696 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 PPP1R18Q6NYC8 613 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 CNKSR3Q6P9H4 555 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 APOA5Q6Q788 366 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 TEX2Q8IWB9 1127 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 MICALL1Q8N3F8 863 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 IL31RAQ8NI17 732 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 KAT2BQ92831 832 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 GPRASP2Q96D09 838 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 JAKMIP1Q96N16 626 aaKnown RBP10.15□□□□□ -0.78
LDB1-203ENST00000461873 INPP4AQ96PE3 977 aaPredicted RBP10.15□□□□□ -0.78
LDB1-203ENST00000461873 PRDM12Q9H4Q4 367 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 PCDHA6Q9UN73 950 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 PCDHA8Q9Y5H6 950 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 V9GY48 417 aaPredicted RBP10.15□□□□□ -0.78
LDB1-203ENST00000461873 COL6A3P12111 3177 aa10.15□□□□□ -0.78
LDB1-203ENST00000461873 ABHD14A-ACY1A0A1B0GW23 586 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 SMCO2A6NFE2 343 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 RSPH10B2B2RC85 870 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 M0QZ92 97 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 MEIS2O14770 477 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
LDB1-203ENST00000461873 RGS20O76081 388 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 AMHP03971 560 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 RSPH10BP0C881 870 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 SMIM10L2AP0DMW4 78 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 SMIM10L2BP0DMW5 78 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 MRPS9P82933 396 aaKnown RBP10.14□□□□□ -0.79
LDB1-203ENST00000461873 ARHGAP4P98171 946 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 SP2Q02086 613 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 UBE2SQ16763 222 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 TSGA10IPQ3SY00 556 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 MCTP2Q6DN12 878 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 CPLX2Q6PUV4 134 aaKnown RBP10.14□□□□□ -0.79
LDB1-203ENST00000461873 Q6ZUG5 572 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 SEPT1Q8WYJ6 367 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 GPKOWQ92917 476 aaPredicted RBP eCLIP10.14□□□□□ -0.79
LDB1-203ENST00000461873 TCEANC2Q96MN5 208 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 C6orf50Q9HD87 102 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 ERAP1Q9NZ08 941 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 PKD2L1Q9P0L9 805 aa10.14□□□□□ -0.79
LDB1-203ENST00000461873 FRMPD4Q14CM0 1322 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 SCN5AQ14524 2016 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 HAS3O00219 553 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 CPLX1O14810 134 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 RPLP2P05387 115 aaKnown RBP10.13□□□□□ -0.79
LDB1-203ENST00000461873 GNA11P29992 359 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 TCF7P36402 384 aaPredicted RBP10.13□□□□□ -0.79
LDB1-203ENST00000461873 RCAN1P53805 252 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 HERC6Q8IVU3 1022 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 TRIM22Q8IYM9 498 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 BICD2Q8TD16 824 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 SEPT8Q92599 483 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 BRF1Q92994 677 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 GPR20Q99678 358 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 SMARCAD1Q9H4L7 1026 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 JPH1Q9HDC5 661 aaPredicted RBP10.13□□□□□ -0.79
LDB1-203ENST00000461873 RIC8AQ9NPQ8 531 aa10.13□□□□□ -0.79
LDB1-203ENST00000461873 NRCAMQ92823 1304 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 CAND2O75155 1236 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 LGR5O75473 907 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 CA3P07451 260 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 EXOSC10Q01780 885 aaKnown RBP10.12□□□□□ -0.79
LDB1-203ENST00000461873 AP3B2Q13367 1082 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 CCDC85BQ15834 202 aaPredicted RBP10.12□□□□□ -0.79
LDB1-203ENST00000461873 SLC35G1Q2M3R5 365 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 ZNF618Q5T7W0 954 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 TAF2Q6P1X5 1199 aa10.12□□□□□ -0.79
LDB1-203ENST00000461873 SKAP1Q86WV1 359 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms