RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PPFIA4O75335 1185 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 TGFB3P10600 412 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 HSPA4P34932 840 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 LRRC8DQ7L1W4 858 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 GPR20Q99678 358 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 TMEM260Q9NX78 707 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 PCDHA6Q9UN73 950 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 PCDHA8Q9Y5H6 950 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 V9GY48 417 aaPredicted RBP17.82■□□□□ 0.44
NUP50-213ENST00000461437 MICAL3Q7RTP6 2002 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 SIP14410 1827 aa17.82■□□□□ 0.44
NUP50-213ENST00000461437 CHD9Q3L8U1 2897 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 TMEM265A0A087WTH1 108 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 CKBP12277 381 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 ATP2A2P16615 1042 aaKnown RBP17.81■□□□□ 0.44
NUP50-213ENST00000461437 ITGB5P18084 799 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
NUP50-213ENST00000461437 NAPAP54920 295 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 FGD1P98174 961 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 KRT32Q14532 448 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 TRIM71Q2Q1W2 868 aaKnown RBP17.81■□□□□ 0.44
NUP50-213ENST00000461437 TRAF7Q6Q0C0 670 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 USP38Q8NB14 1042 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 KCNB2Q92953 911 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 BRF1Q92994 677 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 RBM28Q9NW13 759 aaKnown RBP17.81■□□□□ 0.44
NUP50-213ENST00000461437 MSRAQ9UJ68 235 aa17.81■□□□□ 0.44
NUP50-213ENST00000461437 LOXHD1Q8IVV2 1947 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 SPDYE3A6NKU9 549 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 H3BRB1 525 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 STXBP3O00186 592 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 NBNO60934 754 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 ARHGEF15O94989 841 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 SMIM10L2AP0DMW4 78 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 SMIM10L2BP0DMW5 78 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 SELPP16109 830 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 NEDD9Q14511 834 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 MBTPS1Q14703 1052 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 RAB30Q15771 203 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 ZNF618Q5T7W0 954 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 METTL7BQ6UX53 244 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 NLRX1Q86UT6 975 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 CCDC155Q8N6L0 562 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 CAGE1Q8TC20 777 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 AFAP1L1Q8TED9 768 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 PPM1EQ8WY54 764 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 OSBPL7Q9BZF2 842 aa17.8■□□□□ 0.44
NUP50-213ENST00000461437 TUT1Q9H6E5 874 aaKnown RBP17.8■□□□□ 0.44
NUP50-213ENST00000461437 CHD7Q9P2D1 2997 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 C17orf102A2RUQ5 167 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 TREHO43280 583 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 STAM2O75886 525 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 PFKMP08237 780 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 KCNA2P16389 499 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 RFC2P35250 354 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 PTK7Q13308 1070 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 ADGRE1Q14246 886 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 BLOC1S2Q6QNY1 142 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 SPRED2Q7Z698 418 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
NUP50-213ENST00000461437 CYP2W1Q8TAV3 490 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 COL25A1Q9BXS0 654 aaPredicted RBP17.79■□□□□ 0.44
NUP50-213ENST00000461437 RNPEPQ9H4A4 650 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 CERS4Q9HA82 394 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 PRDM6Q9NQX0 595 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 SETD4Q9NVD3 440 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 UBIAD1Q9Y5Z9 338 aa17.79■□□□□ 0.44
NUP50-213ENST00000461437 NEFLP07196 543 aa17.78■□□□□ 0.44
NUP50-213ENST00000461437 ACTN1P12814 892 aa17.78■□□□□ 0.44
NUP50-213ENST00000461437 METAP2P50579 478 aaKnown RBP eCLIP17.78■□□□□ 0.44
NUP50-213ENST00000461437 DEFB103AP81534 67 aa17.78■□□□□ 0.44
NUP50-213ENST00000461437 PPP2R2DQ66LE6 453 aa17.78■□□□□ 0.44
NUP50-213ENST00000461437 UIMC1Q96RL1 719 aa17.78■□□□□ 0.44
NUP50-213ENST00000461437 SLC28A3Q9HAS3 691 aa17.78■□□□□ 0.44
NUP50-213ENST00000461437 COL4A4P53420 1690 aaPredicted RBP17.77■□□□□ 0.44
NUP50-213ENST00000461437 WDR81Q562E7 1941 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 SMCO2A6NFE2 343 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 RFXAPO00287 272 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 CA3P07451 260 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 CTSHP09668 335 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 RPS6KB1P23443 525 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 MARK3P27448 753 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 TCF7P36402 384 aaPredicted RBP17.77■□□□□ 0.44
NUP50-213ENST00000461437 THPOP40225 353 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 ADCY7P51828 1080 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 RBL2Q08999 1139 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 MTMR1Q13613 665 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 XRRA1Q6P2D8 792 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 ATP6V0A1Q93050 837 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 GPRASP2Q96D09 838 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 LARP6Q9BRS8 491 aaKnown RBP17.77■□□□□ 0.44
NUP50-213ENST00000461437 ANO3Q9BYT9 981 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 RIC8AQ9NPQ8 531 aa17.77■□□□□ 0.44
NUP50-213ENST00000461437 VCANP13611 3396 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 GSTTP1A0A1W2PQM5 241 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 HMGB1P09429 215 aaKnown RBP17.76■□□□□ 0.43
NUP50-213ENST00000461437 ARP10275 920 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 IGFBP4P22692 258 aa17.76■□□□□ 0.43
NUP50-213ENST00000461437 WDR5P61964 334 aaKnown RBP17.76■□□□□ 0.43
NUP50-213ENST00000461437 CCDC85BQ15834 202 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms