RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 H3BNC9 293 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 H3BRB1 525 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 NCK2O43639 380 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 LGALS2P05162 132 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 RPLP2P05387 115 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 GNAT1P11488 350 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 NUCB1Q02818 461 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 NEDD9Q14511 834 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 XRRA1Q6P2D8 792 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 FAM43BQ6ZT52 329 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 CHD1LQ86WJ1 897 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 DBF4BQ8NFT6 615 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 SEPT8Q92599 483 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 TOP1MTQ969P6 601 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 CRBNQ96SW2 442 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 ALG1Q9BT22 464 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 TUT1Q9H6E5 874 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 ZNF215Q9UL58 517 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 RWDD3Q9Y3V2 267 aa16.88■□□□□ 0.29
DNMT3A-207ENST00000461228 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 ALADP13716 330 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 CHMP4BP1P59074 171 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 ADAM17P78536 824 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 HIC1Q14526 733 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 GRM4Q14833 912 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 FAM26DQ5JW98 314 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 TMCO2Q7Z6W1 182 aaPredicted RBP16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 IL31RAQ8NI17 732 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 ATP6V0A1Q93050 837 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 PABPC5Q96DU9 382 aaKnown RBP16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 SENP7Q9BQF6 1050 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 LMAN2LQ9H0V9 348 aa16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 RC3H2Q9HBD1 1191 aaKnown RBP16.87■□□□□ 0.29
DNMT3A-207ENST00000461228 GRXCR2A6NFK2 248 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 FIBPO43427 364 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 SMIM10L2AP0DMW4 78 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 SMIM10L2BP0DMW5 78 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 THPOP40225 353 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 EPC2Q52LR7 807 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 MYOCDQ8IZQ8 938 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 GJD3Q8N144 294 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 STAG2Q8N3U4 1231 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 MAP3K14Q99558 947 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 C17orf80Q9BSJ5 609 aa16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 RWDD1Q9H446 243 aaPredicted RBP16.86■□□□□ 0.29
DNMT3A-207ENST00000461228 PNMA6FA0A0J9YX94 578 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 PIK3CDO00329 1044 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 NOP56O00567 594 aaKnown RBP16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 KCNA5P22460 613 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 SP2Q02086 613 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 PTCRAQ6ISU1 281 aaPredicted RBP16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 TAF2Q6P1X5 1199 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 TEX2Q8IWB9 1127 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 GIMAP8Q8ND71 665 aaPredicted RBP16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 KHSRPQ92945 711 aaKnown RBP eCLIP16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 YME1L1Q96TA2 773 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 NSUN3Q9H649 340 aaKnown RBP16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 MLXIPQ9HAP2 919 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 MTUS1Q9ULD2 1270 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 NRCAMQ92823 1304 aa16.85■□□□□ 0.29
DNMT3A-207ENST00000461228 RB1P06400 928 aa16.84■□□□□ 0.29
DNMT3A-207ENST00000461228 TROAPQ12815 778 aa16.84■□□□□ 0.29
DNMT3A-207ENST00000461228 TRDNQ13061 729 aa16.84■□□□□ 0.29
DNMT3A-207ENST00000461228 BANK1Q8NDB2 785 aa16.84■□□□□ 0.29
DNMT3A-207ENST00000461228 GPR20Q99678 358 aa16.84■□□□□ 0.29
DNMT3A-207ENST00000461228 MTA3Q9BTC8 594 aa16.84■□□□□ 0.29
DNMT3A-207ENST00000461228 CD320Q9NPF0 282 aa16.84■□□□□ 0.29
DNMT3A-207ENST00000461228 ADGRA3Q8IWK6 1321 aa16.84■□□□□ 0.29
DNMT3A-207ENST00000461228 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 SPATA31C2B4DYI2 1134 aa16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 MYCLP12524 364 aaPredicted RBP16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 HOXA13P31271 388 aaPredicted RBP16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 ZNF200P98182 395 aaPredicted RBP16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 MYO7AQ13402 2215 aa16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 SART3Q15020 963 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 PCNX4Q63HM2 1172 aa16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 CLP1Q92989 425 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 CDHR1Q96JP9 859 aa16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 C11orf84Q9BUA3 381 aaPredicted RBP16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 SPZ1Q9BXG8 430 aa16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 IFIH1Q9BYX4 1025 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-207ENST00000461228 C19orf67A6NJJ6 358 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 TREHO43280 583 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 CYTH3O43739 400 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 LINC00271P0C7V0 271 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 MRPS9P82933 396 aaKnown RBP16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 ZP2Q05996 745 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 SEMA3FQ13275 785 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 CTC1Q2NKJ3 1217 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 TMEM192Q8IY95 271 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 LMBR1Q8WVP7 490 aa16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 POP1Q99575 1024 aaKnown RBP16.82■□□□□ 0.28
DNMT3A-207ENST00000461228 RNPEPQ9H4A4 650 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms