RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 YEATS4O95619 227 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 TGFB3P10600 412 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 CYBAP13498 195 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 MCM7P33993 719 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
COL5A3-202ENST00000461214 KRT85P78386 507 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 PRR16Q569H4 304 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 PLA2G4DQ86XP0 818 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 SLFN12Q8IYM2 578 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 MYLIPQ8WY64 445 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 SYMPKQ92797 1274 aaKnown RBP16.3■□□□□ 0.2
COL5A3-202ENST00000461214 LBHD1Q9BQE6 289 aaPredicted RBP16.3■□□□□ 0.2
COL5A3-202ENST00000461214 KCNMB3Q9NPA1 279 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 VCANP13611 3396 aa16.3■□□□□ 0.2
COL5A3-202ENST00000461214 NFASCO94856 1347 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 SPATA31C2B4DYI2 1134 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 CYP2C19P33261 490 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 PRPHP41219 470 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 ATP2C1P98194 919 aaPredicted RBP16.29■□□□□ 0.2
COL5A3-202ENST00000461214 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 TTLL4Q14679 1199 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 LRRC26Q2I0M4 334 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 MAP3K21Q5TCX8 1036 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 FAM173BQ6P4H8 233 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 GIMAP8Q8ND71 665 aaPredicted RBP16.29■□□□□ 0.2
COL5A3-202ENST00000461214 ETNPPLQ8TBG4 499 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 FAM20AQ96MK3 541 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 KCNH7Q9NS40 1196 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 RTEL1Q9NZ71 1219 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 OGDHLQ9ULD0 1010 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 MYH11P35749 1972 aa16.29■□□□□ 0.2
COL5A3-202ENST00000461214 NKRFO15226 690 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL5A3-202ENST00000461214 OR52Z1P0C646 297 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 ATP2B1P20020 1258 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 NBR1Q14596 966 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 SF3A1Q15459 793 aaKnown RBP16.28■□□□□ 0.2
COL5A3-202ENST00000461214 CALCRLQ16602 461 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 ARL6IP4Q66PJ3 421 aaKnown RBP16.28■□□□□ 0.2
COL5A3-202ENST00000461214 TAPT1Q6NXT6 567 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 EEPD1Q7L9B9 569 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 CYP2W1Q8TAV3 490 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 RIT2Q99578 217 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 SENP7Q9BQF6 1050 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 WDR11Q9BZH6 1224 aa16.28■□□□□ 0.2
COL5A3-202ENST00000461214 AGO4Q9HCK5 861 aaKnown RBP16.28■□□□□ 0.2
COL5A3-202ENST00000461214 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
COL5A3-202ENST00000461214 DDX49Q9Y6V7 483 aaKnown RBP16.28■□□□□ 0.2
COL5A3-202ENST00000461214 IPO5O00410 1097 aaKnown RBP16.27■□□□□ 0.2
COL5A3-202ENST00000461214 BAG4O95429 457 aaKnown RBP16.27■□□□□ 0.2
COL5A3-202ENST00000461214 ZNF865P0CJ78 1059 aaPredicted RBP16.27■□□□□ 0.2
COL5A3-202ENST00000461214 PRKAR2AP13861 404 aaKnown RBP16.27■□□□□ 0.2
COL5A3-202ENST00000461214 AKR1A1P14550 325 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 DNM1Q05193 864 aaKnown RBP16.27■□□□□ 0.2
COL5A3-202ENST00000461214 SEMA3FQ13275 785 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 PTPAQ15257 358 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 ZNF174Q15697 407 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 IQSEC1Q6DN90 963 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 SEPT14Q6ZU15 432 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 SLC5A5Q92911 643 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 TNPO1Q92973 898 aaKnown RBP16.27■□□□□ 0.2
COL5A3-202ENST00000461214 MTMR9Q96QG7 549 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 ZNF577Q9BSK1 485 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 SCAND2PQ9GZW5 306 aaPredicted RBP16.27■□□□□ 0.2
COL5A3-202ENST00000461214 SEMA6BQ9H3T3 888 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 TBC1D22BQ9NU19 505 aa16.27■□□□□ 0.2
COL5A3-202ENST00000461214 SCN10AQ9Y5Y9 1956 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 TMEM265A0A087WTH1 108 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 MSH4O15457 936 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 ARP10275 920 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 FOSL2P15408 326 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 KCNA2P16389 499 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 UBA1P22314 1058 aaKnown RBP16.26■□□□□ 0.19
COL5A3-202ENST00000461214 CACNB2Q08289 660 aaPredicted RBP16.26■□□□□ 0.19
COL5A3-202ENST00000461214 PTGDRQ13258 359 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 NEDD9Q14511 834 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 SLC39A14Q15043 492 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 STK38Q15208 465 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 CCDC144BQ3MJ40 725 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 DUSP28Q4G0W2 176 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 CCDC62Q6P9F0 684 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 CLEC17AQ6ZS10 378 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 KCNG4Q8TDN1 519 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 SDF4Q9BRK5 362 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 FTOQ9C0B1 505 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL5A3-202ENST00000461214 TCEAL9Q9UHQ7 104 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 CLIC4Q9Y696 253 aa16.26■□□□□ 0.19
COL5A3-202ENST00000461214 TNFRSF10AO00220 468 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 SEPT4O43236 478 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 MSCO60682 206 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 PPP6R2O75170 966 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 TXNP10599 105 aaKnown RBP16.25■□□□□ 0.19
COL5A3-202ENST00000461214 NCLP19338 710 aaKnown RBP16.25■□□□□ 0.19
COL5A3-202ENST00000461214 TMEM266Q2M3C6 531 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 LRCH2Q5VUJ6 765 aa16.25■□□□□ 0.19
COL5A3-202ENST00000461214 C4orf32Q8N8J7 132 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms