RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 MAFGO15525 162 aa25.71■■□□□ 1.71
TRAF4-207ENST00000461195 CYP2C9P11712 490 aa25.71■■□□□ 1.71
TRAF4-207ENST00000461195 GNA11P29992 359 aa25.71■■□□□ 1.71
TRAF4-207ENST00000461195 MCTP2Q6DN12 878 aa25.71■■□□□ 1.71
TRAF4-207ENST00000461195 CCDC148Q8NFR7 591 aa25.71■■□□□ 1.71
TRAF4-207ENST00000461195 ALG1Q9BT22 464 aa25.71■■□□□ 1.71
TRAF4-207ENST00000461195 UMODL1Q5DID0 1318 aa25.7■■□□□ 1.71
TRAF4-207ENST00000461195 HAS3O00219 553 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 CSF2RAP15509 400 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 SREBF1P36956 1147 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 KIAA0753Q2KHM9 967 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 JAKMIP3Q5VZ66 844 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 C7orf31Q8N865 590 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 GPR20Q99678 358 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 MXRA8Q9BRK3 442 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 C16orf70Q9BSU1 422 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 NOD1Q9Y239 953 aa25.7■■□□□ 1.7
TRAF4-207ENST00000461195 ATP9AO75110 1047 aa25.69■■□□□ 1.7
TRAF4-207ENST00000461195 KCNA2P16389 499 aa25.69■■□□□ 1.7
TRAF4-207ENST00000461195 REXO1Q8N1G1 1221 aaKnown RBP25.69■■□□□ 1.7
TRAF4-207ENST00000461195 BICD2Q8TD16 824 aa25.69■■□□□ 1.7
TRAF4-207ENST00000461195 SLKQ9H2G2 1235 aaPredicted RBP25.69■■□□□ 1.7
TRAF4-207ENST00000461195 SH3GLB2Q9NR46 395 aa25.69■■□□□ 1.7
TRAF4-207ENST00000461195 VPS54Q9P1Q0 977 aa25.69■■□□□ 1.7
TRAF4-207ENST00000461195 HDAC6Q9UBN7 1215 aa25.69■■□□□ 1.7
TRAF4-207ENST00000461195 TPCN1Q9ULQ1 816 aa25.69■■□□□ 1.7
TRAF4-207ENST00000461195 DEXIO95424 95 aa25.68■■□□□ 1.7
TRAF4-207ENST00000461195 LGALS2P05162 132 aa25.68■■□□□ 1.7
TRAF4-207ENST00000461195 AK2P54819 239 aa25.68■■□□□ 1.7
TRAF4-207ENST00000461195 CCL23P55773 120 aa25.68■■□□□ 1.7
TRAF4-207ENST00000461195 PTGISQ16647 500 aa25.68■■□□□ 1.7
TRAF4-207ENST00000461195 GDF6Q6KF10 455 aaPredicted RBP25.68■■□□□ 1.7
TRAF4-207ENST00000461195 MTMR10Q9NXD2 777 aa25.68■■□□□ 1.7
TRAF4-207ENST00000461195 GTF2IRD1Q9UHL9 959 aa25.68■■□□□ 1.7
TRAF4-207ENST00000461195 H3BRB1 525 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 PFKFB2O60825 505 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 CDKL5O76039 1030 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 ARHGAP4P98171 946 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 SP4Q02446 784 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 SCRN1Q12765 414 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 C8orf34Q49A92 452 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 CEP55Q53EZ4 464 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 RNPC3Q96LT9 517 aaKnown RBP25.67■■□□□ 1.7
TRAF4-207ENST00000461195 WNT8AQ9H1J5 351 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 TUT1Q9H6E5 874 aaKnown RBP25.67■■□□□ 1.7
TRAF4-207ENST00000461195 IL23AQ9NPF7 189 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 PKD2L1Q9P0L9 805 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 STXBP5LQ9Y2K9 1186 aa25.67■■□□□ 1.7
TRAF4-207ENST00000461195 LAMA2P24043 3122 aaKnown RBP25.66■■□□□ 1.7
TRAF4-207ENST00000461195 ADAMTS3O15072 1205 aa25.66■■□□□ 1.7
TRAF4-207ENST00000461195 ZNF76P36508 570 aa25.66■■□□□ 1.7
TRAF4-207ENST00000461195 CYP2W1Q8TAV3 490 aa25.66■■□□□ 1.7
TRAF4-207ENST00000461195 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.66■■□□□ 1.74e-8■■□□□ 13.9
TRAF4-207ENST00000461195 KCNH7Q9NS40 1196 aa25.66■■□□□ 1.7
TRAF4-207ENST00000461195 PITPNM1O00562 1244 aa25.65■■□□□ 1.7
TRAF4-207ENST00000461195 NEK4P51957 841 aa25.65■■□□□ 1.7
TRAF4-207ENST00000461195 NLRP5P59047 1200 aa25.65■■□□□ 1.7
TRAF4-207ENST00000461195 BFSP2Q13515 415 aa25.65■■□□□ 1.7
TRAF4-207ENST00000461195 PSRC1Q6PGN9 363 aaPredicted RBP25.65■■□□□ 1.7
TRAF4-207ENST00000461195 C16orf59Q7L2K0 433 aa25.65■■□□□ 1.7
TRAF4-207ENST00000461195 TELO2Q9Y4R8 837 aa25.65■■□□□ 1.7
TRAF4-207ENST00000461195 MEIS1O00470 390 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 CYP3A4P08684 503 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 ACRP10323 421 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 TMEM240Q5SV17 173 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 UTP14CQ5TAP6 766 aaKnown RBP25.64■■□□□ 1.7
TRAF4-207ENST00000461195 NIPA1Q7RTP0 329 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 CCDC155Q8N6L0 562 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 RETREG2Q8NC44 543 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 CRYGNQ8WXF5 182 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 SCLYQ96I15 445 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 CTAGE1Q96RT6 745 aa25.64■■□□□ 1.7
TRAF4-207ENST00000461195 ZNF215Q9UL58 517 aaPredicted RBP25.64■■□□□ 1.7
TRAF4-207ENST00000461195 ARP10275 920 aa25.63■■□□□ 1.69
TRAF4-207ENST00000461195 ZNF365Q70YC5 407 aa25.63■■□□□ 1.69
TRAF4-207ENST00000461195 RPUSD2Q8IZ73 545 aaKnown RBP25.63■■□□□ 1.69
TRAF4-207ENST00000461195 FAM177A1Q8N128 213 aaPredicted RBP25.63■■□□□ 1.69
TRAF4-207ENST00000461195 CAGE1Q8TC20 777 aa25.63■■□□□ 1.69
TRAF4-207ENST00000461195 RASGRP4Q8TDF6 673 aa25.63■■□□□ 1.69
TRAF4-207ENST00000461195 SEPT1Q8WYJ6 367 aa25.63■■□□□ 1.69
TRAF4-207ENST00000461195 TANC1Q9C0D5 1861 aa25.63■■□□□ 1.69
TRAF4-207ENST00000461195 NFASCO94856 1347 aa25.63■■□□□ 1.69
TRAF4-207ENST00000461195 TRIP12Q14669 1992 aaPredicted RBP25.62■■□□□ 1.69
TRAF4-207ENST00000461195 TCF7P36402 384 aaPredicted RBP25.62■■□□□ 1.69
TRAF4-207ENST00000461195 TRIM50Q86XT4 487 aa25.62■■□□□ 1.69
TRAF4-207ENST00000461195 SDF4Q9BRK5 362 aa25.62■■□□□ 1.69
TRAF4-207ENST00000461195 AGO4Q9HCK5 861 aaKnown RBP25.62■■□□□ 1.69
TRAF4-207ENST00000461195 JPH1Q9HDC5 661 aaPredicted RBP25.62■■□□□ 1.69
TRAF4-207ENST00000461195 STK36Q9NRP7 1315 aa25.62■■□□□ 1.69
TRAF4-207ENST00000461195 GSTTP1A0A1W2PQM5 241 aa25.61■■□□□ 1.69
TRAF4-207ENST00000461195 PTK7Q13308 1070 aa25.61■■□□□ 1.69
TRAF4-207ENST00000461195 PLA2G4DQ86XP0 818 aa25.61■■□□□ 1.69
TRAF4-207ENST00000461195 AIFM3Q96NN9 605 aa25.61■■□□□ 1.69
TRAF4-207ENST00000461195 SLC9A2Q9UBY0 812 aa25.61■■□□□ 1.69
TRAF4-207ENST00000461195 PCDHA4Q9UN74 947 aa25.61■■□□□ 1.69
TRAF4-207ENST00000461195 SCN5AQ14524 2016 aa25.6■■□□□ 1.69
TRAF4-207ENST00000461195 FAM86B1E9PN63 330 aa25.6■■□□□ 1.69
TRAF4-207ENST00000461195 FGBP02675 491 aa25.6■■□□□ 1.69
TRAF4-207ENST00000461195 FAM86B2P0C5J1 330 aa25.6■■□□□ 1.69
TRAF4-207ENST00000461195 IQCF3P0C7M6 154 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms