RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 CUL4AQ13619 759 aa18.47■□□□□ 0.55
SHANK1-205ENST00000461154 METTL7BQ6UX53 244 aa18.47■□□□□ 0.55
SHANK1-205ENST00000461154 HSCBQ8IWL3 235 aa18.47■□□□□ 0.55
SHANK1-205ENST00000461154 DIS3L2Q8IYB7 885 aaKnown RBP18.47■□□□□ 0.55
SHANK1-205ENST00000461154 FBXO18Q8NFZ0 1043 aa18.47■□□□□ 0.55
SHANK1-205ENST00000461154 PPTC7Q8NI37 304 aa18.47■□□□□ 0.55
SHANK1-205ENST00000461154 OXER1Q8TDS5 423 aa18.47■□□□□ 0.55
SHANK1-205ENST00000461154 AFG1LQ8WV93 481 aa18.47■□□□□ 0.55
SHANK1-205ENST00000461154 SPATA33Q96N06 139 aa18.47■□□□□ 0.55
SHANK1-205ENST00000461154 GDF15Q99988 308 aa18.47■□□□□ 0.55
SHANK1-205ENST00000461154 LBHD1Q9BQE6 289 aaPredicted RBP18.47■□□□□ 0.55
SHANK1-205ENST00000461154 CEP290O15078 2479 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 FAM86B1E9PN63 330 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 NOP56O00567 594 aaKnown RBP18.46■□□□□ 0.55
SHANK1-205ENST00000461154 MYL3P08590 195 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 CLTBP09497 229 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 FAM86B2P0C5J1 330 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 GJB2P29033 226 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 BMP8BP34820 402 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 GUCY1B3Q02153 619 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 DGKDQ16760 1214 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 PIK3AP1Q6ZUJ8 805 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 CYFIP1Q7L576 1253 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 PLA2G4DQ86XP0 818 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 CYP2W1Q8TAV3 490 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 NAP1L4Q99733 375 aaKnown RBP18.46■□□□□ 0.55
SHANK1-205ENST00000461154 SDF4Q9BRK5 362 aa18.46■□□□□ 0.55
SHANK1-205ENST00000461154 PRDM5Q9NQX1 630 aaPredicted RBP18.46■□□□□ 0.55
SHANK1-205ENST00000461154 BTBD18B2RXH4 712 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 TLR3O15455 904 aaKnown RBP18.45■□□□□ 0.54
SHANK1-205ENST00000461154 MMP3P08254 477 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 KCNA2P16389 499 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 MAGEA10P43363 369 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-205ENST00000461154 PURAQ00577 322 aaKnown RBP18.45■□□□□ 0.54
SHANK1-205ENST00000461154 NR5A1Q13285 461 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 ITGA7Q13683 1181 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 INF2Q27J81 1249 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 HABP4Q5JVS0 413 aaKnown RBP18.45■□□□□ 0.54
SHANK1-205ENST00000461154 MOXD1Q6UVY6 613 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 NEK8Q86SG6 692 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 SLC43A3Q8NBI5 491 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 MTG1Q9BT17 334 aaPredicted RBP18.45■□□□□ 0.54
SHANK1-205ENST00000461154 PRO3102Q9H379 93 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 AGO4Q9HCK5 861 aaKnown RBP18.45■□□□□ 0.54
SHANK1-205ENST00000461154 PDLIM7Q9NR12 457 aa18.45■□□□□ 0.54
SHANK1-205ENST00000461154 IGLV3-22A0A075B6J6 115 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 A0A1W2PPC1 479 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 SORBS3O60504 671 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 PPFIA4O75335 1185 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 ARP10275 920 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 GNL2Q13823 731 aaKnown RBP18.44■□□□□ 0.54
SHANK1-205ENST00000461154 PRR16Q569H4 304 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 TNFRSF25Q93038 417 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 INTS4Q96HW7 963 aaKnown RBP18.44■□□□□ 0.54
SHANK1-205ENST00000461154 FOXP1Q9H334 677 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-205ENST00000461154 TMEM39AQ9NV64 488 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 PKD2L1Q9P0L9 805 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 PCDH10Q9P2E7 1040 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 NFASCO94856 1347 aa18.44■□□□□ 0.54
SHANK1-205ENST00000461154 CYP3A7-CYP3A51PA0A087WV96 503 aa18.43■□□□□ 0.54
SHANK1-205ENST00000461154 KIAA0355O15063 1070 aa18.43■□□□□ 0.54
SHANK1-205ENST00000461154 ATP9AO75110 1047 aa18.43■□□□□ 0.54
SHANK1-205ENST00000461154 GCFC2P16383 781 aaKnown RBP18.43■□□□□ 0.54
SHANK1-205ENST00000461154 CYP3A7P24462 503 aa18.43■□□□□ 0.54
SHANK1-205ENST00000461154 FAAP100Q0VG06 881 aa18.43■□□□□ 0.54
SHANK1-205ENST00000461154 LETM2Q2VYF4 491 aa18.43■□□□□ 0.54
SHANK1-205ENST00000461154 HSDL1Q3SXM5 330 aa18.43■□□□□ 0.54
SHANK1-205ENST00000461154 ZNF577Q9BSK1 485 aa18.43■□□□□ 0.54
SHANK1-205ENST00000461154 JPH1Q9HDC5 661 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-205ENST00000461154 DOCK5Q9H7D0 1870 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 TRIM43BA6NCK2 446 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 H3BQV1 296 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 IPO5O00410 1097 aaKnown RBP18.42■□□□□ 0.54
SHANK1-205ENST00000461154 HOXD8P13378 290 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-205ENST00000461154 PSMC6P62333 389 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 MDM2Q00987 491 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-205ENST00000461154 Q4G0T1 1027 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 SH3RF1Q7Z6J0 888 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 FAM126BQ8IXS8 530 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 TRIM43Q96BQ3 446 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-205ENST00000461154 KATNAL1Q9BW62 490 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 UBE2OQ9C0C9 1292 aaKnown RBP18.42■□□□□ 0.54
SHANK1-205ENST00000461154 TBC1D22BQ9NU19 505 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 SLC9A2Q9UBY0 812 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 TCEAL9Q9UHQ7 104 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 GRIN2DO15399 1336 aa18.42■□□□□ 0.54
SHANK1-205ENST00000461154 RAG1P15918 1043 aa18.41■□□□□ 0.54
SHANK1-205ENST00000461154 PDCP20941 246 aa18.41■□□□□ 0.54
SHANK1-205ENST00000461154 SP4Q02446 784 aa18.41■□□□□ 0.54
SHANK1-205ENST00000461154 PPP4R3AQ6IN85 833 aa18.41■□□□□ 0.54
SHANK1-205ENST00000461154 SEPT1Q8WYJ6 367 aa18.41■□□□□ 0.54
SHANK1-205ENST00000461154 LENG9Q96B70 501 aa18.41■□□□□ 0.54
SHANK1-205ENST00000461154 MBOAT7Q96N66 472 aa18.41■□□□□ 0.54
SHANK1-205ENST00000461154 GPR20Q99678 358 aa18.41■□□□□ 0.54
SHANK1-205ENST00000461154 BCAS3Q9H6U6 928 aa18.41■□□□□ 0.54
SHANK1-205ENST00000461154 DDX25Q9UHL0 483 aaKnown RBP18.41■□□□□ 0.54
SHANK1-205ENST00000461154 EDIL3O43854 480 aa18.4■□□□□ 0.54
SHANK1-205ENST00000461154 CCNT1O60563 726 aaKnown RBP18.4■□□□□ 0.54
SHANK1-205ENST00000461154 TDP2O95551 362 aa18.4■□□□□ 0.54
SHANK1-205ENST00000461154 CD4P01730 458 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms