RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 FSCN1Q16658 493 aaKnown RBP14.38□□□□□ -0.11
HDAC4-207ENST00000461113 POTEBQ6S5H4 581 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 TLK2Q86UE8 772 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 CLEC4DQ8WXI8 215 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 WASF1Q92558 559 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 KATNBL1Q9H079 304 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 NCOA5Q9HCD5 579 aaKnown RBP14.38□□□□□ -0.11
HDAC4-207ENST00000461113 FAM217BQ9NTX9 383 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-207ENST00000461113 CYP39A1Q9NYL5 469 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 CNTNAP5Q8WYK1 1306 aa14.38□□□□□ -0.11
HDAC4-207ENST00000461113 WDFY4Q6ZS81 3184 aa14.37□□□□□ -0.11
HDAC4-207ENST00000461113 DYNC1LI2O43237 492 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-207ENST00000461113 ZEB2O60315 1214 aa14.37□□□□□ -0.11
HDAC4-207ENST00000461113 RPS6P62753 249 aaKnown RBP14.37□□□□□ -0.11
HDAC4-207ENST00000461113 PPP1R18Q6NYC8 613 aa14.37□□□□□ -0.11
HDAC4-207ENST00000461113 HFE2Q6ZVN8 426 aa14.37□□□□□ -0.11
HDAC4-207ENST00000461113 TEX2Q8IWB9 1127 aa14.37□□□□□ -0.11
HDAC4-207ENST00000461113 SMARCC2Q8TAQ2 1214 aa14.37□□□□□ -0.11
HDAC4-207ENST00000461113 KIF2CQ99661 725 aa14.37□□□□□ -0.11
HDAC4-207ENST00000461113 FTOQ9C0B1 505 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC4-207ENST00000461113 AP5M1Q9H0R1 490 aa14.37□□□□□ -0.11
HDAC4-207ENST00000461113 PSTPIP2Q9H939 334 aa14.37□□□□□ -0.11
HDAC4-207ENST00000461113 TRMT13Q9NUP7 481 aaKnown RBP14.37□□□□□ -0.11
HDAC4-207ENST00000461113 GNEQ9Y223 722 aaKnown RBP14.37□□□□□ -0.11
HDAC4-207ENST00000461113 ZNFX1Q9P2E3 1918 aaKnown RBP14.37□□□□□ -0.11
HDAC4-207ENST00000461113 LOC102724159A0A0B4J2E5 919 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 hCG_1642624A0A1W2PR95 340 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 LCHNA4D1U4 455 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 GRXCR2A6NFK2 248 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 DEXIO95424 95 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 SCG2P13521 617 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 SCRN1Q12765 414 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 PWP2Q15269 919 aaKnown RBP14.36□□□□□ -0.11
HDAC4-207ENST00000461113 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-207ENST00000461113 SLC35G1Q2M3R5 365 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 FAM133AQ8N9E0 248 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 CCDC148Q8NFR7 591 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 DNERQ8NFT8 737 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 PHKBQ93100 1093 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 EHMT1Q9H9B1 1298 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 MTUS1Q9ULD2 1270 aa14.36□□□□□ -0.11
HDAC4-207ENST00000461113 PPP1R11O60927 126 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-207ENST00000461113 SUPT20HL2P0C7V6 817 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 GNA11P29992 359 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 CNTN2Q02246 1040 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 FUT2Q10981 343 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 ME3Q16798 604 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 ARHGEF16Q5VV41 709 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 NECAB1Q8N987 351 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 BICD2Q8TD16 824 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 NSUN6Q8TEA1 469 aaKnown RBP14.35□□□□□ -0.11
HDAC4-207ENST00000461113 GTF3C6Q969F1 213 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 MFSD14AQ96MC6 490 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 C6orf50Q9HD87 102 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 BARHL2Q9NY43 387 aa14.35□□□□□ -0.11
HDAC4-207ENST00000461113 CACNA1AO00555 2505 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 SPDYE3A6NKU9 549 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 SMPD1P17405 629 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 RFC2P35250 354 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 ADCY7P51828 1080 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 PDE4DQ08499 809 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 NTRK3Q16288 839 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 MCTP2Q6DN12 878 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 SLC30A10Q6XR72 485 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 TMCO2Q7Z6W1 182 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-207ENST00000461113 FCHSD1Q86WN1 690 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 SYTL5Q8TDW5 730 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-207ENST00000461113 GPKOWQ92917 476 aaPredicted RBP eCLIP14.34□□□□□ -0.11
HDAC4-207ENST00000461113 RMDN3Q96TC7 470 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 LLPHQ9BRT6 129 aaKnown RBP14.34□□□□□ -0.11
HDAC4-207ENST00000461113 SUGCTQ9HAC7 445 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 ORC3Q9UBD5 711 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-207ENST00000461113 KIF3AQ9Y496 699 aa14.34□□□□□ -0.11
HDAC4-207ENST00000461113 SMCO2A6NFE2 343 aa14.33□□□□□ -0.12
HDAC4-207ENST00000461113 H3BQ06 376 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-207ENST00000461113 ALDH5A1P51649 535 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-207ENST00000461113 HSD17B4P51659 736 aa14.33□□□□□ -0.12
HDAC4-207ENST00000461113 NLRP5P59047 1200 aa14.33□□□□□ -0.12
HDAC4-207ENST00000461113 TRIM29Q14134 588 aa14.33□□□□□ -0.12
HDAC4-207ENST00000461113 PUS10Q3MIT2 529 aaKnown RBP14.33□□□□□ -0.12
HDAC4-207ENST00000461113 TMEM63BQ5T3F8 832 aa14.33□□□□□ -0.12
HDAC4-207ENST00000461113 FAM177A1Q8N128 213 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-207ENST00000461113 PRSS33Q8NF86 280 aa14.33□□□□□ -0.12
HDAC4-207ENST00000461113 IWS1Q96ST2 819 aa14.33□□□□□ -0.12
HDAC4-207ENST00000461113 ZBED2Q9BTP6 218 aa14.33□□□□□ -0.12
HDAC4-207ENST00000461113 SH3GLB2Q9NR46 395 aa14.33□□□□□ -0.12
HDAC4-207ENST00000461113 SOWAHBA6NEL2 793 aa14.32□□□□□ -0.12
HDAC4-207ENST00000461113 STXBP3O00186 592 aa14.32□□□□□ -0.12
HDAC4-207ENST00000461113 PIK3CDO00329 1044 aa14.32□□□□□ -0.12
HDAC4-207ENST00000461113 FOSP01100 380 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-207ENST00000461113 IQCF3P0C7M6 154 aa14.32□□□□□ -0.12
HDAC4-207ENST00000461113 HOXA13P31271 388 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-207ENST00000461113 KCNJ6P48051 423 aa14.32□□□□□ -0.12
HDAC4-207ENST00000461113 HMGN5P82970 282 aaKnown RBP14.32□□□□□ -0.12
HDAC4-207ENST00000461113 FOXK2Q01167 660 aa14.32□□□□□ -0.12
HDAC4-207ENST00000461113 GHRHRQ02643 423 aa14.32□□□□□ -0.12
HDAC4-207ENST00000461113 CCDC83Q8IWF9 413 aa14.32□□□□□ -0.12
HDAC4-207ENST00000461113 FAM184AQ8NB25 1140 aa14.32□□□□□ -0.12
HDAC4-207ENST00000461113 RETREG2Q8NC44 543 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms