RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 USP17L3A6NCW0 530 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 USP17L4A6NCW7 530 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 LGR5O75473 907 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 USP17L8P0C7I0 530 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 ITIH3Q06033 890 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 PSMD2Q13200 908 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 RAPGEF1Q13905 1077 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 USP17L1Q7RTZ2 530 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 DYDC1Q8WWB3 177 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 ZNF570Q96NI8 536 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 XPO6Q96QU8 1125 aaKnown RBP13.66□□□□□ -0.22
AGRN-203ENST00000461111 UBA5Q9GZZ9 404 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 NDST4Q9H3R1 872 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 PLCB1Q9NQ66 1216 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 DISC1Q9NRI5 854 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 ABCF3Q9NUQ8 709 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.66□□□□□ -0.221e-8■■□□□ 12.3
AGRN-203ENST00000461111 PPIP5K2O43314 1243 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 CHN1P15882 459 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 HSPA9P38646 679 aaKnown RBP13.66□□□□□ -0.22
AGRN-203ENST00000461111 RPS6KA1Q15418 735 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 CCDC152Q4G0S7 254 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 DZIP1Q86YF9 867 aaKnown RBP13.66□□□□□ -0.22
AGRN-203ENST00000461111 FAM114A1Q8IWE2 563 aa13.66□□□□□ -0.22
AGRN-203ENST00000461111 CAND2O75155 1236 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 SMIM24O75264 130 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 PLCG1P19174 1290 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 ARID4AP29374 1257 aaPredicted RBP13.65□□□□□ -0.22
AGRN-203ENST00000461111 LRRC14Q15048 493 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 CCDC38Q502W7 563 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 MIIPQ5JXC2 388 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 CABP7Q86V35 215 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 ERICH1Q86X53 443 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 CD302Q8IX05 232 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 SLC17A8Q8NDX2 589 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 BIN2Q9UBW5 565 aaPredicted RBP13.65□□□□□ -0.22
AGRN-203ENST00000461111 GGA2Q9UJY4 613 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 KRIT1O00522 736 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
AGRN-203ENST00000461111 KRT18P05783 430 aaKnown RBP13.65□□□□□ -0.22
AGRN-203ENST00000461111 CCNE1P24864 410 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 ZNF662Q6ZS27 426 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 GJA10Q969M2 543 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 PSMD1Q99460 953 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
AGRN-203ENST00000461111 MTFR1LQ9H019 292 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 TRIM33Q9UPN9 1127 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 AGAP1Q9UPQ3 857 aa13.65□□□□□ -0.22
AGRN-203ENST00000461111 IGF2BP3O00425 579 aaKnown RBP eCLIP13.65□□□□□ -0.23
AGRN-203ENST00000461111 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.23
AGRN-203ENST00000461111 ORC4O43929 436 aa13.65□□□□□ -0.23
AGRN-203ENST00000461111 ITGA4P13612 1032 aa13.65□□□□□ -0.23
AGRN-203ENST00000461111 TAF11Q15544 211 aa13.65□□□□□ -0.23
AGRN-203ENST00000461111 TRMT1LQ7Z2T5 733 aaKnown RBP13.65□□□□□ -0.23
AGRN-203ENST00000461111 ZNF444Q8N0Y2 327 aaPredicted RBP13.65□□□□□ -0.23
AGRN-203ENST00000461111 KLHL29Q96CT2 875 aa13.65□□□□□ -0.23
AGRN-203ENST00000461111 KDM4CQ9H3R0 1056 aa13.65□□□□□ -0.23
AGRN-203ENST00000461111 UBOX5O94941 541 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 SHBGP04278 402 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 TSPY3P0CV98 308 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 TSPY8P0CW00 308 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 COPB2P35606 906 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 ALDH5A1P51649 535 aaPredicted RBP13.64□□□□□ -0.23
AGRN-203ENST00000461111 POLR2FP61218 127 aaKnown RBP13.64□□□□□ -0.23
AGRN-203ENST00000461111 VWA3BQ502W6 1294 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 TCERG1LQ5VWI1 586 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 PRMT1Q99873 361 aaKnown RBP13.64□□□□□ -0.23
AGRN-203ENST00000461111 SEPT11Q9NVA2 429 aaKnown RBP13.64□□□□□ -0.23
AGRN-203ENST00000461111 ETAA1Q9NY74 926 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 SWAP70Q9UH65 585 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 G3BP2Q9UN86 482 aaKnown RBP13.64□□□□□ -0.23
AGRN-203ENST00000461111 MRC1P22897 1456 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 BICDL2A1A5D9 508 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 TRAF5O00463 557 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 TTI1O43156 1089 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 DNAJC8O75937 253 aaPredicted RBP13.64□□□□□ -0.23
AGRN-203ENST00000461111 KIF5BP33176 963 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 PCK1P35558 622 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 ADCY2Q08462 1091 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 SEMA3FQ13275 785 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 BIRC3Q13489 604 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 C11orf91Q3C1V1 193 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 MARCH10Q8NA82 808 aaPredicted RBP13.64□□□□□ -0.23
AGRN-203ENST00000461111 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 MAGEC3Q8TD91 643 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 RUBCNQ92622 972 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 ECT2Q9H8V3 914 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 BATF3Q9NR55 127 aa13.64□□□□□ -0.23
AGRN-203ENST00000461111 SNUPNO95149 360 aaKnown RBP13.63□□□□□ -0.23
AGRN-203ENST00000461111 PRDX5P30044 214 aa13.63□□□□□ -0.23
AGRN-203ENST00000461111 NAALADL2Q58DX5 795 aa13.63□□□□□ -0.23
AGRN-203ENST00000461111 PNMA1Q8ND90 353 aa13.63□□□□□ -0.23
AGRN-203ENST00000461111 CCDC26Q8TAB7 109 aa13.63□□□□□ -0.23
AGRN-203ENST00000461111 ARHGEF10LQ9HCE6 1279 aa13.63□□□□□ -0.23
AGRN-203ENST00000461111 INTS9Q9NV88 658 aaKnown RBP13.63□□□□□ -0.23
AGRN-203ENST00000461111 FAM205AQ6ZU69 1335 aa13.63□□□□□ -0.23
AGRN-203ENST00000461111 MROH5Q6ZUA9 1318 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms