RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 SMC3Q9UQE7 1217 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 MTMR6Q9Y217 621 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 FRMPD3Q5JV73 1810 aa9.3□□□□□ -0.92
SND1-202ENST00000461056 CCDC85CA6NKD9 419 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 DYNC1LI2O43237 492 aaPredicted RBP9.29□□□□□ -0.92
SND1-202ENST00000461056 GGPS1O95749 300 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 GH1P01241 217 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 MMP3P08254 477 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 HOXC8P31273 242 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 BEX3Q00994 111 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 SPIRE1Q08AE8 756 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 RESTQ13127 1097 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 FSCN1Q16658 493 aaKnown RBP9.29□□□□□ -0.92
SND1-202ENST00000461056 HSDL1Q3SXM5 330 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 NEK8Q86SG6 692 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 NLRX1Q86UT6 975 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 HSCBQ8IWL3 235 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 PLCD3Q8N3E9 789 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 C4orf32Q8N8J7 132 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 AFG1LQ8WV93 481 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 CDHR1Q96JP9 859 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 MTMR9Q96QG7 549 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 PCYT2Q99447 389 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 GPR20Q99678 358 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 EHMT1Q9H9B1 1298 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 VAV3Q9UKW4 847 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 MRVI1Q9Y6F6 885 aa9.29□□□□□ -0.92
SND1-202ENST00000461056 PDE4DIPQ5VU43 2346 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 IGKV6D-21A0A0A0MT36 114 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 CCDC194A0A1B0GVG4 234 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 A0A1W2PQ45 241 aaPredicted RBP9.28□□□□□ -0.92
SND1-202ENST00000461056 GSTTP1A0A1W2PQM5 241 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 A0A1W2PQY0 241 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 HAS3O00219 553 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 LGR5O75473 907 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 PSMD10O75832 226 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 ATG7O95352 703 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 F2P00734 622 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 GCFC2P16383 781 aaKnown RBP9.28□□□□□ -0.92
SND1-202ENST00000461056 TRAPPC10P48553 1259 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 CDK7P50613 346 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 CLCN6P51797 869 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 ACLYP53396 1101 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 PURAQ00577 322 aaKnown RBP9.28□□□□□ -0.92
SND1-202ENST00000461056 SETQ01105 290 aaPredicted RBP9.28□□□□□ -0.92
SND1-202ENST00000461056 LAMC2Q13753 1193 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 KCNA10Q16322 511 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 PRR16Q569H4 304 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 C1orf53Q5VUE5 145 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 PLA2G4DQ86XP0 818 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 FAM184AQ8NB25 1140 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 ARRDC4Q8NCT1 418 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 OR6J1Q8NGC5 347 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 GJA10Q969M2 543 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 CTAGE1Q96RT6 745 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 C16orf70Q9BSU1 422 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 TSPYL2Q9H2G4 693 aaPredicted RBP9.28□□□□□ -0.92
SND1-202ENST00000461056 TMEM60Q9H2L4 133 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 ZDHHC9Q9Y397 364 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 KIF3AQ9Y496 699 aa9.28□□□□□ -0.92
SND1-202ENST00000461056 MOXD2PA6NHM9 499 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 IPO5O00410 1097 aaKnown RBP9.27□□□□□ -0.93
SND1-202ENST00000461056 TFRCP02786 760 aaKnown RBP9.27□□□□□ -0.93
SND1-202ENST00000461056 ASGR1P07306 291 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 C6orf222P0C671 652 aaPredicted RBP9.27□□□□□ -0.93
SND1-202ENST00000461056 PKP1Q13835 747 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 TRIM29Q14134 588 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 NEDD9Q14511 834 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 NBR1Q14596 966 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 LETM2Q2VYF4 491 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 LARP1BQ659C4 914 aaKnown RBP9.27□□□□□ -0.93
SND1-202ENST00000461056 ABHD15Q6UXT9 468 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 CYFIP1Q7L576 1253 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 RNF180Q86T96 592 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 PAWRQ96IZ0 340 aaKnown RBP9.27□□□□□ -0.93
SND1-202ENST00000461056 SPATA33Q96N06 139 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 RIT2Q99578 217 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 BRMS1Q9HCU9 246 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 DDX25Q9UHL0 483 aaKnown RBP9.27□□□□□ -0.93
SND1-202ENST00000461056 ELP1O95163 1332 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 KIAA1217Q5T5P2 1943 aa9.27□□□□□ -0.93
SND1-202ENST00000461056 SCN10AQ9Y5Y9 1956 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 TBX3O15119 743 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 PPFIA4O75335 1185 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 PDCP20941 246 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 CPT1AP50416 773 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 ACTR2P61160 394 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 ORC2Q13416 577 aaPredicted RBP9.26□□□□□ -0.93
SND1-202ENST00000461056 HIC1Q14526 733 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 SAFBQ15424 915 aaKnown RBP eCLIP9.26□□□□□ -0.93
SND1-202ENST00000461056 LRRC26Q2I0M4 334 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 GNASQ5JWF2 1037 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 CXCL17Q6UXB2 119 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 DHX37Q8IY37 1157 aaKnown RBP9.26□□□□□ -0.93
SND1-202ENST00000461056 GIMAP8Q8ND71 665 aaPredicted RBP9.26□□□□□ -0.93
SND1-202ENST00000461056 AP5M1Q9H0R1 490 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 C11orf49Q9H6J7 331 aa9.26□□□□□ -0.93
SND1-202ENST00000461056 JPH1Q9HDC5 661 aaPredicted RBP9.26□□□□□ -0.93
SND1-202ENST00000461056 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms