RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 RAB33AQ14088 237 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 EGFLAMQ63HQ2 1017 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 LILRA6Q6PI73 481 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 REC114Q7Z4M0 266 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 FAM9BQ8IZU0 186 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 HNRNPLLQ8WVV9 542 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 LINC01599Q8WXQ3 324 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 INTS4Q96HW7 963 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 SHDQ96IW2 340 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 YTHDC1Q96MU7 727 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 CAMKK2Q96RR4 588 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 THUMPD2Q9BTF0 503 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 LRRC3Q9BY71 257 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 MCOLN1Q9GZU1 580 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 PRKAG3Q9UGI9 489 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 KLHL3Q9UH77 587 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 PPT2Q9UMR5 302 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 THRAP3Q9Y2W1 955 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 KDRP35968 1356 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 TNS2Q63HR2 1409 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 TOGARAM1Q9Y4F4 1720 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 DNAJA2O60884 412 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 PHKG2P15735 406 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 CDK11BP21127 795 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 CWF19L2Q2TBE0 894 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 CCDC81Q6ZN84 652 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 JAZF1Q86VZ6 243 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 NLGN1Q8N2Q7 840 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 PNISRQ8TF01 805 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 SHISA4Q96DD7 197 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 PLEKHF1Q96S99 279 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 SRPK1Q96SB4 655 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 ZNF552Q9H707 407 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 EBF1Q9UH73 591 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 KDM6AO15550 1401 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 PKD1L3Q7Z443 1732 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 CASZ1Q86V15 1759 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 SBF2Q86WG5 1849 aa6.13□□□□□ -1.43
ATPAF1-203ENST00000460928 MYOCOSA0A1B0GUC4 107 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 RGS13O14921 159 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 GRIN3BO60391 1043 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 ZNF165P49910 485 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 EIF6P56537 245 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 DLG4P78352 724 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 PLEKHO1Q53GL0 409 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 RNF111Q6ZNA4 994 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 SMIM5Q71RC9 77 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 MCM10Q7L590 875 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 PHACTR4Q8IZ21 702 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 IL17REQ8NFR9 667 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 SYTL5Q8TDW5 730 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 DOT1LQ8TEK3 1739 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 FERD3LQ96RJ6 166 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 CRBNQ96SW2 442 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 SYT17Q9BSW7 474 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 G6PC3Q9BUM1 346 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 MIS18AQ9NYP9 233 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 NUDCQ9Y266 331 aa6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 MRPL42Q9Y6G3 142 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-203ENST00000460928 DLG5Q8TDM6 1919 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 ITGB4P16144 1822 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 NCANO14594 1321 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 TEX51A0A1B0GUA7 166 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 APAF1O14727 1248 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 SMAD7O15105 426 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 KCNQ3O43525 872 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 NUAK1O60285 661 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 GIPRP48546 466 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 RNF4P78317 190 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 WDR43Q15061 677 aaKnown RBP eCLIP6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 TCEAL1Q15170 157 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 GPR162Q16538 588 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 CLEC16AQ2KHT3 1053 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 TNNI3KQ59H18 835 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 FBXW10Q5XX13 1052 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 DAGLBQ8NCG7 672 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 KIF2CQ99661 725 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 HDAC8Q9BY41 377 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 KRTAP4-5Q9BYR2 181 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 BRMS1Q9HCU9 246 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 BTAF1O14981 1849 aa6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 VIRMAQ69YN4 1812 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-203ENST00000460928 ATP10DQ9P241 1426 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 PCDH11XQ9BZA7 1347 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 PCDH11YQ9BZA8 1340 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 NOTOA8MTQ0 251 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 PSPNO60542 156 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 CLSTN1O94985 981 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 ATE1O95260 518 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 GBP1P32455 592 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 NMIQ13287 307 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 SLC39A6Q13433 755 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 GK5Q6ZS86 529 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 ZNF605Q86T29 641 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 IFNL2Q8IZJ0 200 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 REXO1Q8N1G1 1221 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 PIGBQ92521 554 aa6.1□□□□□ -1.43
ATPAF1-203ENST00000460928 DEPDC7Q96QD5 511 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms