RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 DDX41Q9UJV9 622 aaKnown RBP10.88□□□□□ -0.67
COL6A2-207ENST00000460886 PRRC2BQ5JSZ5 2229 aaKnown RBP10.88□□□□□ -0.67
COL6A2-207ENST00000460886 ZBBXA8MT70 800 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 HAS3O00219 553 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 PFKFB2O60825 505 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 EIF3JO75822 258 aaKnown RBP10.87□□□□□ -0.67
COL6A2-207ENST00000460886 PARNO95453 639 aaKnown RBP10.87□□□□□ -0.67
COL6A2-207ENST00000460886 CXCL10P02778 98 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 CA3P07451 260 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 AKAP17AQ02040 695 aaKnown RBP10.87□□□□□ -0.67
COL6A2-207ENST00000460886 SCRN1Q12765 414 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 RABEP1Q15276 862 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 ME3Q16798 604 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 LY6KQ17RY6 165 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 FAM47CQ5HY64 1035 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 SAMD3Q8N6K7 520 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 CCDC155Q8N6L0 562 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 RETREG2Q8NC44 543 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 GPKOWQ92917 476 aaPredicted RBP eCLIP10.87□□□□□ -0.67
COL6A2-207ENST00000460886 RMDN3Q96TC7 470 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 SLC26A6Q9BXS9 759 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 PXMP2Q9NR77 195 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 GTF2IRD1Q9UHL9 959 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 MYH7BA7E2Y1 1941 aa10.87□□□□□ -0.67
COL6A2-207ENST00000460886 COL4A4P53420 1690 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-207ENST00000460886 GCOM1H8Y6P7 765 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-207ENST00000460886 PRPF3O43395 683 aaKnown RBP10.86□□□□□ -0.67
COL6A2-207ENST00000460886 LARGE1O95461 756 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 F2P00734 622 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 POLR2MP0CAP2 368 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 IFNAR1P17181 557 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 IGFBP4P22692 258 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 HOXA13P31271 388 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-207ENST00000460886 TAP1Q03518 808 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 SSRP1Q08945 709 aaKnown RBP10.86□□□□□ -0.67
COL6A2-207ENST00000460886 PTGISQ16647 500 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 DGKDQ16760 1214 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 WWC2Q6AWC2 1192 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 GDF6Q6KF10 455 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-207ENST00000460886 CPLX2Q6PUV4 134 aaKnown RBP10.86□□□□□ -0.67
COL6A2-207ENST00000460886 SEPT14Q6ZU15 432 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 HERC6Q8IVU3 1022 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 NECAB1Q8N987 351 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 PPTC7Q8NI37 304 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 ADAMTS19Q8TE59 1207 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 PPM1EQ8WY54 764 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 DHX38Q92620 1227 aaKnown RBP10.86□□□□□ -0.67
COL6A2-207ENST00000460886 LIMCH1Q9UPQ0 1083 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 MTCH2Q9Y6C9 303 aa10.86□□□□□ -0.67
COL6A2-207ENST00000460886 DTNBO60941 627 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 RGS20O76081 388 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 ARHGEF15O94989 841 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 NR3C2P08235 984 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 BMP1P13497 986 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 SCG2P13521 617 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 SELPP16109 830 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 NAPAP54920 295 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 LAMC2Q13753 1193 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 CCDC85BQ15834 202 aaPredicted RBP10.85□□□□□ -0.67
COL6A2-207ENST00000460886 PKN1Q16512 942 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 PFKFB3Q16875 520 aaPredicted RBP10.85□□□□□ -0.67
COL6A2-207ENST00000460886 TRIM71Q2Q1W2 868 aaKnown RBP10.85□□□□□ -0.67
COL6A2-207ENST00000460886 TRAF7Q6Q0C0 670 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 FCHSD1Q86WN1 690 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 TRIM22Q8IYM9 498 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 CUL5Q93034 780 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 PDCD2LQ9BRP1 358 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 KATNAL1Q9BW62 490 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 RNF26Q9BY78 433 aaPredicted RBP10.85□□□□□ -0.67
COL6A2-207ENST00000460886 TSPYL2Q9H2G4 693 aaPredicted RBP10.85□□□□□ -0.67
COL6A2-207ENST00000460886 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 NOD1Q9Y239 953 aa10.85□□□□□ -0.67
COL6A2-207ENST00000460886 EPOPA6NHQ4 379 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 STXBP3O00186 592 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 ST18O60284 1047 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 PPFIA4O75335 1185 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 CDKL5O76039 1030 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 TGFB3P10600 412 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 CKBP12277 381 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 EIF2AK2P19525 551 aaKnown RBP10.84□□□□□ -0.67
COL6A2-207ENST00000460886 HOXC8P31273 242 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 PSEN2P49810 448 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 WDR5P61964 334 aaKnown RBP10.84□□□□□ -0.67
COL6A2-207ENST00000460886 PTK7Q13308 1070 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 MKRN4PQ13434 485 aaPredicted RBP10.84□□□□□ -0.67
COL6A2-207ENST00000460886 ARHGEF16Q5VV41 709 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 MYSM1Q5VVJ2 828 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 TYW1BQ6NUM6 668 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 CNKSR3Q6P9H4 555 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 KCNV1Q6PIU1 500 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 LRRC8DQ7L1W4 858 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 VSIG10LQ86VR7 867 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 SMARCC2Q8TAQ2 1214 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 GTF3C6Q969F1 213 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 BARHL2Q9NY43 387 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 HDAC6Q9UBN7 1215 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 MRVI1Q9Y6F6 885 aa10.84□□□□□ -0.67
COL6A2-207ENST00000460886 SIP14410 1827 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms