RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 PCDHB4Q9Y5E5 795 aa3.39□□□□□ -1.87
PTPN22-203ENST00000460620 NPFFR2Q9Y5X5 522 aa3.39□□□□□ -1.87
PTPN22-203ENST00000460620 TCRBV5S2A0A599 114 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 DDX3XO00571 662 aaKnown RBP eCLIP3.38□□□□□ -1.87
PTPN22-203ENST00000460620 PPFIA2O75334 1257 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 MAP4K2Q12851 820 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 SLC35F1Q5T1Q4 408 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 PRAMEF18Q5VWM3 479 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 GLB1LQ6UWU2 654 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 TMEM145Q8NBT3 493 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 LOXL4Q96JB6 756 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 CHAMP1Q96JM3 812 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 SYT3Q9BQG1 590 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 SMOC1Q9H4F8 434 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 CLDND1Q9NY35 253 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 PCDHA2Q9Y5H9 948 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 MRVI1Q9Y6F6 885 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 B2RBV5 119 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 CAPNS1P04632 268 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 ERCC5P28715 1186 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-203ENST00000460620 PRSS53Q2L4Q9 553 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 TEPPQ6URK8 271 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 STK32CQ86UX6 486 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 CHST13Q8NET6 341 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.38□□□□□ -1.87
PTPN22-203ENST00000460620 KCTD13Q8WZ19 329 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 C1orf159Q96HA4 380 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 YTHDC1Q96MU7 727 aaKnown RBP3.38□□□□□ -1.87
PTPN22-203ENST00000460620 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.38□□□□□ -1.87
PTPN22-203ENST00000460620 SSBP3Q9BWW4 388 aaPredicted RBP3.38□□□□□ -1.87
PTPN22-203ENST00000460620 KRTAP3-1Q9BYR8 98 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 TMEM168Q9H0V1 697 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 L2HGDHQ9H9P8 463 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 FBXL7Q9UJT9 491 aa3.38□□□□□ -1.87
PTPN22-203ENST00000460620 ZNF536O15090 1300 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 KRIT1O00522 736 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 LAMTOR5O43504 91 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 CYP1A1P04798 512 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-203ENST00000460620 LCP1P13796 627 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 ZNF20P17024 532 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 IL13P35225 146 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 ETFBP38117 255 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 SF1Q15637 639 aaKnown RBP3.37□□□□□ -1.87
PTPN22-203ENST00000460620 MRM1Q6IN84 353 aaKnown RBP3.37□□□□□ -1.87
PTPN22-203ENST00000460620 DENND5AQ6IQ26 1287 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 PKN3Q6P5Z2 889 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 RSPO2Q6UXX9 243 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-203ENST00000460620 GLCCI1Q86VQ1 547 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 TRIM48Q8IWZ4 208 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 HOMEZQ8IX15 550 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 ARRDC4Q8NCT1 418 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 TTLL11Q8NHH1 800 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 DVL3Q92997 716 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-203ENST00000460620 C8orf49Q96NF6 230 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 GPR27Q9NS67 375 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 MYOTQ9UBF9 498 aa3.37□□□□□ -1.87
PTPN22-203ENST00000460620 B4GALT3O60512 393 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 LRG1P02750 347 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 FGRP09769 529 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 SLC10A6Q3KNW5 377 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 KLHL36Q8N4N3 616 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 MBD6Q96DN6 1003 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 SGSM3Q96HU1 749 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 SLC6A20Q9NP91 592 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 FTSJ1Q9UET6 329 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 R3HCC1Q9Y3T6 440 aaKnown RBP3.36□□□□□ -1.87
PTPN22-203ENST00000460620 NUB1Q9Y5A7 615 aa3.36□□□□□ -1.87
PTPN22-203ENST00000460620 IQCA1LA6NCM1 817 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 GJB6O95452 261 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 EPHB4P54760 987 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 PPP2R2AP63151 447 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 ARID5AQ03989 594 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 MICAL1Q8TDZ2 1067 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 CDIP1Q9H305 208 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 ZNF408Q9H9D4 720 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 ASH2LQ9UBL3 628 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 A0A1W2PQU0 124 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 NPEPPSL1A6NEC2 478 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 CHGBP05060 677 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 MLLT6P55198 1093 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-203ENST00000460620 HSP90AA2PQ14568 343 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-203ENST00000460620 ARHGEF18Q6ZSZ5 1173 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 ZCCHC14Q8WYQ9 949 aaKnown RBP3.35□□□□□ -1.87
PTPN22-203ENST00000460620 KISS1RQ969F8 398 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-203ENST00000460620 ZSWIM3Q96MP5 696 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 CDK5RAP1Q96SZ6 601 aaKnown RBP3.35□□□□□ -1.87
PTPN22-203ENST00000460620 ZFYVE21Q9BQ24 234 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 IER2Q9BTL4 223 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 PDGFDQ9GZP0 370 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-203ENST00000460620 BARX1Q9HBU1 254 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-203ENST00000460620 PPP4R1LQ9P1A2 415 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 CROTQ9UKG9 612 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 TSC22D4Q9Y3Q8 395 aa3.35□□□□□ -1.87
PTPN22-203ENST00000460620 TCF3P15923 654 aa3.34□□□□□ -1.87
PTPN22-203ENST00000460620 NANOS3P60323 173 aaKnown RBP3.34□□□□□ -1.87
PTPN22-203ENST00000460620 PPP2CBP62714 309 aa3.34□□□□□ -1.87
PTPN22-203ENST00000460620 PPP2CAP67775 309 aa3.34□□□□□ -1.87
PTPN22-203ENST00000460620 NFATC3Q12968 1075 aa3.34□□□□□ -1.87
PTPN22-203ENST00000460620 VASNQ6EMK4 673 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms