RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 METTL7BQ6UX53 244 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 DTHD1Q6ZMT9 781 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 FBXO16Q8IX29 292 aaPredicted RBP12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 ARRDC4Q8NCT1 418 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 RDM1Q8NG50 284 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 ERMNQ8TAM6 284 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 FERMT2Q96AC1 680 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 FGD4Q96M96 766 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 POLR3EQ9NVU0 708 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 PARP14Q460N5 1801 aa12.45□□□□□ -0.42
SMNDC1-203ENST00000460483 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 FAM86B1E9PN63 330 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 GOLGA6L22H0YM25 854 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 YEATS4O95619 227 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 IGHA2P01877 340 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 FAM86B2P0C5J1 330 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 OR52Z1P0C646 297 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 ZNF865P0CJ78 1059 aaPredicted RBP12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 CYBAP13498 195 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 DDIT3P35638 169 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 TXLNAP40222 546 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 STK38Q15208 465 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 ZNF174Q15697 407 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 LRCH2Q5VUJ6 765 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 RNF180Q86T96 592 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 PCSK9Q8NBP7 692 aaKnown RBP12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 EMID1Q96A84 441 aaPredicted RBP12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 ARMC5Q96C12 935 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 GBP4Q96PP9 640 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 AGO4Q9HCK5 861 aaKnown RBP12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 JPH1Q9HDC5 661 aaPredicted RBP12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 FLRT1Q9NZU1 646 aa12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 DDX20Q9UHI6 824 aaKnown RBP12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 DDX41Q9UJV9 622 aaKnown RBP12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 MORC2Q9Y6X9 1032 aaPredicted RBP12.44□□□□□ -0.42
SMNDC1-203ENST00000460483 ASTN1O14525 1302 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 IGLV3-22A0A075B6J6 115 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 GOLGA6L4A6NEF3 574 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 TDP2O95551 362 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 JAK3P52333 1124 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 PDIA5Q14554 519 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 CELF3Q5SZQ8 465 aaKnown RBP12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 FOXD4L5Q5VV16 416 aaPredicted RBP12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 ZNF746Q6NUN9 644 aaPredicted RBP12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 TAPT1Q6NXT6 567 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 MIS18BP1Q6P0N0 1132 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 SPNS2Q8IVW8 549 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 KCTD17Q8N5Z5 321 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 EFCAB3Q8N7B9 438 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 IL31RAQ8NI17 732 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 FOXD4L4Q8WXT5 416 aaPredicted RBP12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 AK8Q96MA6 479 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 KCNMB3Q9NPA1 279 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
SMNDC1-203ENST00000460483 CEP350Q5VT06 3117 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 FAM205CA6NFA0 338 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 WDR64B1ANS9 1081 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 SLC26A4O43511 780 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 PPP6R2O75170 966 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 PPFIA4O75335 1185 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 GGPS1O95749 300 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 ADCYAP1R1P41586 468 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 TXKP42681 527 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 SLC26A2P50443 739 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 ATP2C1P98194 919 aaPredicted RBP12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 PTGDRQ13258 359 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 SLC39A14Q15043 492 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 EARS2Q5JPH6 523 aaKnown RBP12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 HAUS3Q68CZ6 603 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 CCDC62Q6P9F0 684 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 OR6J1Q8NGC5 347 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 NEK9Q8TD19 979 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 SEPT1Q8WYJ6 367 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 SLC5A5Q92911 643 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 CCDC34Q96HJ3 373 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 SPATA33Q96N06 139 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 PYM1Q9BRP8 204 aaKnown RBP12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 SEZ6LQ9BYH1 1024 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 RNF208Q9H0X6 261 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 TTC12Q9H892 705 aaPredicted RBP12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 XPNPEP3Q9NQH7 507 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 SAMM50Q9Y512 469 aa12.42□□□□□ -0.42
SMNDC1-203ENST00000460483 COL11A1P12107 1806 aaPredicted RBP12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 SPTLC2O15270 562 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 MSH4O15457 936 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 CABYRO75952 493 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 PSAPP07602 524 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 ARP10275 920 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 KCNA2P16389 499 aa12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 UBA1P22314 1058 aaKnown RBP12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 LONP1P36776 959 aaKnown RBP12.41□□□□□ -0.42
SMNDC1-203ENST00000460483 NASPP49321 788 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms