RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
CCDC12-204ENST00000460035 SENP7Q9BQF6 1050 aa12.33□□□□□ -0.44
CCDC12-204ENST00000460035 SDF4Q9BRK5 362 aa12.33□□□□□ -0.44
CCDC12-204ENST00000460035 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
CCDC12-204ENST00000460035 FOXP1Q9H334 677 aaPredicted RBP12.33□□□□□ -0.44
CCDC12-204ENST00000460035 C11orf49Q9H6J7 331 aa12.33□□□□□ -0.44
CCDC12-204ENST00000460035 CYP3A7-CYP3A51PA0A087WV96 503 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 VPS37CA5D8V6 355 aaPredicted RBP12.32□□□□□ -0.44
CCDC12-204ENST00000460035 NOP56O00567 594 aaKnown RBP12.32□□□□□ -0.44
CCDC12-204ENST00000460035 MARCH6O60337 910 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 CCNT1O60563 726 aaKnown RBP12.32□□□□□ -0.44
CCDC12-204ENST00000460035 TDP2O95551 362 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 ASGR1P07306 291 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 CYP3A7P24462 503 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 ACLYP53396 1101 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 CHMP4BP1P59074 171 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 SETQ01105 290 aaPredicted RBP12.32□□□□□ -0.44
CCDC12-204ENST00000460035 CCSAPQ6IQ19 270 aaPredicted RBP12.32□□□□□ -0.44
CCDC12-204ENST00000460035 CXCL17Q6UXB2 119 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 MBOAT7Q96N66 472 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 NAP1L4Q99733 375 aaKnown RBP12.32□□□□□ -0.44
CCDC12-204ENST00000460035 ZNF577Q9BSK1 485 aa12.32□□□□□ -0.44
CCDC12-204ENST00000460035 AGO4Q9HCK5 861 aaKnown RBP12.32□□□□□ -0.44
CCDC12-204ENST00000460035 DDX25Q9UHL0 483 aaKnown RBP12.32□□□□□ -0.44
CCDC12-204ENST00000460035 LOXHD1Q8IVV2 1947 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 MOXD2PA6NHM9 499 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 A6NJR5 290 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 KIF28PB7ZC32 967 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 DDX39AO00148 427 aaKnown RBP12.31□□□□□ -0.44
CCDC12-204ENST00000460035 KPNA6O60684 536 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 COL6A1P12109 1028 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 GCFC2P16383 781 aaKnown RBP12.31□□□□□ -0.44
CCDC12-204ENST00000460035 KCNA2P16389 499 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 U2AF2P26368 475 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC12-204ENST00000460035 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
CCDC12-204ENST00000460035 METTL7BQ6UX53 244 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 NOSTRINQ8IVI9 506 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 LENG9Q96B70 501 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 GLT1D1Q96MS3 346 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 POLR3EQ9NVU0 708 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 PHF24Q9UPV7 400 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 NFASCO94856 1347 aa12.31□□□□□ -0.44
CCDC12-204ENST00000460035 IPO5O00410 1097 aaKnown RBP12.3□□□□□ -0.44
CCDC12-204ENST00000460035 MSH4O15457 936 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 PPFIA4O75335 1185 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 MMP3P08254 477 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-204ENST00000460035 SYT1P21579 422 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 RGS19P49795 217 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 DGKDQ16760 1214 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 HSDL1Q3SXM5 330 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 Q4G0T1 1027 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 UTP14CQ5TAP6 766 aaKnown RBP12.3□□□□□ -0.44
CCDC12-204ENST00000460035 PPP4R3AQ6IN85 833 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 PPTC7Q8NI37 304 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 JPH1Q9HDC5 661 aaPredicted RBP12.3□□□□□ -0.44
CCDC12-204ENST00000460035 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 SLC9A2Q9UBY0 812 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
CCDC12-204ENST00000460035 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
CCDC12-204ENST00000460035 A0A1W2PQ45 241 aaPredicted RBP12.29□□□□□ -0.44
CCDC12-204ENST00000460035 A0A1W2PQY0 241 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 GAS7O60861 476 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 CABYRO75952 493 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 ITGB3BPQ13352 177 aaPredicted RBP12.29□□□□□ -0.44
CCDC12-204ENST00000460035 ZNF174Q15697 407 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 SEPT1Q8WYJ6 367 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 DPF3Q92784 378 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 GJA10Q969M2 543 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 GPR20Q99678 358 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
CCDC12-204ENST00000460035 HTATIP2Q9BUP3 242 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 TBC1D22BQ9NU19 505 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 TCEAL9Q9UHQ7 104 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 TELO2Q9Y4R8 837 aa12.29□□□□□ -0.44
CCDC12-204ENST00000460035 DHX15O43143 795 aaKnown RBP12.28□□□□□ -0.44
CCDC12-204ENST00000460035 STX6O43752 255 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 SLC37A4O43826 429 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 BAG4O95429 457 aaKnown RBP12.28□□□□□ -0.44
CCDC12-204ENST00000460035 MCM7P33993 719 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 TRAPPC10P48553 1259 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 PSMC6P62333 389 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 PURAQ00577 322 aaKnown RBP12.28□□□□□ -0.44
CCDC12-204ENST00000460035 ORC2Q13416 577 aaPredicted RBP12.28□□□□□ -0.44
CCDC12-204ENST00000460035 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 SLC39A5Q6ZMH5 540 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 FERMT3Q86UX7 667 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 SLC5A5Q92911 643 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 TEKT3Q9BXF9 490 aa12.28□□□□□ -0.44
CCDC12-204ENST00000460035 GSTTP1A0A1W2PQM5 241 aa12.27□□□□□ -0.45
CCDC12-204ENST00000460035 TBX3O15119 743 aa12.27□□□□□ -0.45
CCDC12-204ENST00000460035 ZNF286BP0CG31 522 aa12.27□□□□□ -0.45
CCDC12-204ENST00000460035 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
CCDC12-204ENST00000460035 TCF7P36402 384 aaPredicted RBP12.27□□□□□ -0.45
CCDC12-204ENST00000460035 ACTR2P61160 394 aa12.27□□□□□ -0.45
CCDC12-204ENST00000460035 ITGA7Q13683 1181 aa12.27□□□□□ -0.45
CCDC12-204ENST00000460035 CALCRLQ16602 461 aa12.27□□□□□ -0.45
CCDC12-204ENST00000460035 LRRC26Q2I0M4 334 aa12.27□□□□□ -0.45
CCDC12-204ENST00000460035 FAM47CQ5HY64 1035 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms