RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 RPUSD2Q8IZ73 545 aaKnown RBP21.23■□□□□ 0.99
HOXD3-204ENST00000459979 RNF26Q9BY78 433 aaPredicted RBP21.23■□□□□ 0.99
HOXD3-204ENST00000459979 TCF20Q9UGU0 1960 aaKnown RBP21.23■□□□□ 0.99
HOXD3-204ENST00000459979 CHD9Q3L8U1 2897 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 TET1Q8NFU7 2136 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 SPDYE3A6NKU9 549 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 SCG2P13521 617 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 SP2Q02086 613 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 PKN1Q16512 942 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 NBPF20Q3BBV1 942 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 CELF3Q5SZQ8 465 aaKnown RBP21.22■□□□□ 0.99
HOXD3-204ENST00000459979 DHX37Q8IY37 1157 aaKnown RBP21.22■□□□□ 0.99
HOXD3-204ENST00000459979 PPTC7Q8NI37 304 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 PDRG1Q9NUG6 133 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 THEGQ9P2T0 379 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 TTC28Q96AY4 2481 aa21.22■□□□□ 0.99
HOXD3-204ENST00000459979 ESYT2A0FGR8 921 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 SMCO2A6NFE2 343 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 FIBPO43427 364 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 FOSP01100 380 aaPredicted RBP21.21■□□□□ 0.99
HOXD3-204ENST00000459979 UBA1P22314 1058 aaKnown RBP21.21■□□□□ 0.99
HOXD3-204ENST00000459979 PTPN11Q06124 597 aaPredicted RBP21.21■□□□□ 0.99
HOXD3-204ENST00000459979 DGKDQ16760 1214 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 UBE2SQ16763 222 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 PPP2R2DQ66LE6 453 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 NFRKBQ6P4R8 1299 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 PCDHA6Q9UN73 950 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 PCDHA8Q9Y5H6 950 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 PTPRSQ13332 1948 aa21.21■□□□□ 0.99
HOXD3-204ENST00000459979 PPFIA4O75335 1185 aa21.2■□□□□ 0.98
HOXD3-204ENST00000459979 GGPS1O95749 300 aa21.2■□□□□ 0.98
HOXD3-204ENST00000459979 SUPT20HL2P0C7V6 817 aa21.2■□□□□ 0.98
HOXD3-204ENST00000459979 ATP2A2P16615 1042 aaKnown RBP21.2■□□□□ 0.98
HOXD3-204ENST00000459979 CLK2P49760 499 aaKnown RBP21.2■□□□□ 0.98
HOXD3-204ENST00000459979 ADCY7P51828 1080 aa21.2■□□□□ 0.98
HOXD3-204ENST00000459979 CHMP4BP1P59074 171 aa21.2■□□□□ 0.98
HOXD3-204ENST00000459979 SEMA3FQ13275 785 aa21.2■□□□□ 0.98
HOXD3-204ENST00000459979 MICALL1Q8N3F8 863 aa21.2■□□□□ 0.98
HOXD3-204ENST00000459979 ZFP91Q96JP5 570 aaPredicted RBP21.2■□□□□ 0.98
HOXD3-204ENST00000459979 SENP7Q9BQF6 1050 aa21.2■□□□□ 0.98
HOXD3-204ENST00000459979 EHMT1Q9H9B1 1298 aa21.2■□□□□ 0.98
HOXD3-204ENST00000459979 TNFRSF10AO00220 468 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 SEC24BO95487 1268 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 CCT2P78371 535 aaKnown RBP21.19■□□□□ 0.98
HOXD3-204ENST00000459979 NEDD9Q14511 834 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 NLRX1Q86UT6 975 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 CCDC12Q8WUD4 166 aaPredicted RBP21.19■□□□□ 0.98
HOXD3-204ENST00000459979 KAT2BQ92831 832 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 PHKBQ93100 1093 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 GPRASP2Q96D09 838 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 CDHR1Q96JP9 859 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 ZMYND12Q9H0C1 365 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 RTEL1Q9NZ71 1219 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 PCDHA11Q9Y5I1 949 aa21.19■□□□□ 0.98
HOXD3-204ENST00000459979 CHD7Q9P2D1 2997 aa21.18■□□□□ 0.98
HOXD3-204ENST00000459979 RFXAPO00287 272 aa21.18■□□□□ 0.98
HOXD3-204ENST00000459979 MAFGO15525 162 aa21.18■□□□□ 0.98
HOXD3-204ENST00000459979 AKAP17AQ02040 695 aaKnown RBP21.18■□□□□ 0.98
HOXD3-204ENST00000459979 AP3B2Q13367 1082 aa21.18■□□□□ 0.98
HOXD3-204ENST00000459979 HSDL1Q3SXM5 330 aa21.18■□□□□ 0.98
HOXD3-204ENST00000459979 SESTD1Q86VW0 696 aa21.18■□□□□ 0.98
HOXD3-204ENST00000459979 ATXN2LQ8WWM7 1075 aaKnown RBP21.18■□□□□ 0.98
HOXD3-204ENST00000459979 ASB2Q96Q27 587 aa21.18■□□□□ 0.98
HOXD3-204ENST00000459979 NCOA5Q9HCD5 579 aaKnown RBP21.18■□□□□ 0.98
HOXD3-204ENST00000459979 UBIAD1Q9Y5Z9 338 aa21.18■□□□□ 0.98
HOXD3-204ENST00000459979 RBAK-RBAKDNI3L0D1 243 aa21.17■□□□□ 0.98
HOXD3-204ENST00000459979 F2P00734 622 aa21.17■□□□□ 0.98
HOXD3-204ENST00000459979 ITGB5P18084 799 aa21.17■□□□□ 0.98
HOXD3-204ENST00000459979 MCTP2Q6DN12 878 aa21.17■□□□□ 0.98
HOXD3-204ENST00000459979 METTL7BQ6UX53 244 aa21.17■□□□□ 0.98
HOXD3-204ENST00000459979 GIMAP8Q8ND71 665 aaPredicted RBP21.17■□□□□ 0.98
HOXD3-204ENST00000459979 SPATA33Q96N06 139 aa21.17■□□□□ 0.98
HOXD3-204ENST00000459979 CERS4Q9HA82 394 aa21.17■□□□□ 0.98
HOXD3-204ENST00000459979 MLXIPQ9HAP2 919 aa21.17■□□□□ 0.98
HOXD3-204ENST00000459979 HAS3O00219 553 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 CA3P07451 260 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 PFKMP08237 780 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 ANKRD1Q15327 319 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 ADAMTS19Q8TE59 1207 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 KATNAL1Q9BW62 490 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 SLC26A6Q9BXS9 759 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 C6orf50Q9HD87 102 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 JADE2Q9NQC1 790 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 SH3GLB2Q9NR46 395 aa21.16■□□□□ 0.98
HOXD3-204ENST00000459979 PRRC2BQ5JSZ5 2229 aaKnown RBP21.16■□□□□ 0.98
HOXD3-204ENST00000459979 IQCF3P0C7M6 154 aa21.15■□□□□ 0.98
HOXD3-204ENST00000459979 GNA11P29992 359 aa21.15■□□□□ 0.98
HOXD3-204ENST00000459979 SREBF1P36956 1147 aa21.15■□□□□ 0.98
HOXD3-204ENST00000459979 MRPS5P82675 430 aaKnown RBP21.15■□□□□ 0.98
HOXD3-204ENST00000459979 C8orf34Q49A92 452 aa21.15■□□□□ 0.98
HOXD3-204ENST00000459979 CPLX2Q6PUV4 134 aaKnown RBP21.15■□□□□ 0.98
HOXD3-204ENST00000459979 TRIM22Q8IYM9 498 aa21.15■□□□□ 0.98
HOXD3-204ENST00000459979 FAM177A1Q8N128 213 aaPredicted RBP21.15■□□□□ 0.98
HOXD3-204ENST00000459979 LARP6Q9BRS8 491 aaKnown RBP21.15■□□□□ 0.98
HOXD3-204ENST00000459979 ANO3Q9BYT9 981 aa21.15■□□□□ 0.98
HOXD3-204ENST00000459979 BCAS3Q9H6U6 928 aa21.15■□□□□ 0.98
HOXD3-204ENST00000459979 DOCK5Q9H7D0 1870 aa21.14■□□□□ 0.97
HOXD3-204ENST00000459979 CPLX1O14810 134 aa21.14■□□□□ 0.97
HOXD3-204ENST00000459979 PFKFB2O60825 505 aa21.14■□□□□ 0.97
HOXD3-204ENST00000459979 ARHGEF15O94989 841 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms