RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 PQBP1O60828 265 aaKnown RBP24.77■■□□□ 1.56
SSNA1-202ENST00000459860 DTNBO60941 627 aa24.77■■□□□ 1.56
SSNA1-202ENST00000459860 METTL7BQ6UX53 244 aa24.77■■□□□ 1.56
SSNA1-202ENST00000459860 PHF20Q9BVI0 1012 aa24.77■■□□□ 1.56
SSNA1-202ENST00000459860 KCNJ14Q9UNX9 436 aa24.77■■□□□ 1.56
SSNA1-202ENST00000459860 DCDC2CA8MYV0 355 aa24.76■■□□□ 1.55
SSNA1-202ENST00000459860 ARVCFO00192 962 aa24.76■■□□□ 1.55
SSNA1-202ENST00000459860 TLR3O15455 904 aaKnown RBP24.76■■□□□ 1.55
SSNA1-202ENST00000459860 CYP3A4P08684 503 aa24.76■■□□□ 1.55
SSNA1-202ENST00000459860 FDPSP14324 419 aaKnown RBP24.76■■□□□ 1.55
SSNA1-202ENST00000459860 HMGN5P82970 282 aaKnown RBP24.76■■□□□ 1.55
SSNA1-202ENST00000459860 ST3GAL1Q11201 340 aa24.76■■□□□ 1.55
SSNA1-202ENST00000459860 ITGA7Q13683 1181 aa24.76■■□□□ 1.55
SSNA1-202ENST00000459860 CYFIP1Q7L576 1253 aa24.76■■□□□ 1.55
SSNA1-202ENST00000459860 GUCD1Q96NT3 240 aa24.76■■□□□ 1.55
SSNA1-202ENST00000459860 PDLIM7Q9NR12 457 aa24.76■■□□□ 1.55
SSNA1-202ENST00000459860 SCN10AQ9Y5Y9 1956 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 ADAMTS3O15072 1205 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 SETQ01105 290 aaPredicted RBP24.75■■□□□ 1.55
SSNA1-202ENST00000459860 TLE2Q04725 743 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 HSDL1Q3SXM5 330 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 NIPA1Q7RTP0 329 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 KRT25Q7Z3Z0 450 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 SH3RF1Q7Z6J0 888 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 TOX2Q96NM4 488 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 KATNAL1Q9BW62 490 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 PRDM5Q9NQX1 630 aaPredicted RBP24.75■■□□□ 1.55
SSNA1-202ENST00000459860 PKD2L1Q9P0L9 805 aa24.75■■□□□ 1.55
SSNA1-202ENST00000459860 CCDC194A0A1B0GVG4 234 aa24.74■■□□□ 1.55
SSNA1-202ENST00000459860 TRIM43BA6NCK2 446 aa24.74■■□□□ 1.55
SSNA1-202ENST00000459860 PSMC6P62333 389 aa24.74■■□□□ 1.55
SSNA1-202ENST00000459860 SHHQ15465 462 aa24.74■■□□□ 1.55
SSNA1-202ENST00000459860 C9orf50Q5SZB4 431 aa24.74■■□□□ 1.55
SSNA1-202ENST00000459860 ANKRD33Q7Z3H0 272 aa24.74■■□□□ 1.55
SSNA1-202ENST00000459860 FAM184AQ8NB25 1140 aa24.74■■□□□ 1.55
SSNA1-202ENST00000459860 TRIM43Q96BQ3 446 aaPredicted RBP24.74■■□□□ 1.55
SSNA1-202ENST00000459860 SDF4Q9BRK5 362 aa24.74■■□□□ 1.55
SSNA1-202ENST00000459860 KCNH7Q9NS40 1196 aa24.74■■□□□ 1.55
SSNA1-202ENST00000459860 MEIS1O00470 390 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 PPFIA4O75335 1185 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 CLTBP09497 229 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 KCNA2P16389 499 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 KRT2P35908 639 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 CHMP4BP1P59074 171 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 SP4Q02446 784 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 NONOQ15233 471 aaKnown RBP eCLIP24.73■■□□□ 1.55
SSNA1-202ENST00000459860 PLA2G4DQ86XP0 818 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 TBCKQ8TEA7 893 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 CRYGNQ8WXF5 182 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 BADQ92934 168 aa24.73■■□□□ 1.55
SSNA1-202ENST00000459860 CDK7P50613 346 aa24.72■■□□□ 1.55
SSNA1-202ENST00000459860 USP11P51784 963 aa24.72■■□□□ 1.55
SSNA1-202ENST00000459860 NPY5RQ15761 445 aa24.72■■□□□ 1.55
SSNA1-202ENST00000459860 FAM47CQ5HY64 1035 aa24.72■■□□□ 1.55
SSNA1-202ENST00000459860 SLC43A3Q8NBI5 491 aa24.72■■□□□ 1.55
SSNA1-202ENST00000459860 CYP2W1Q8TAV3 490 aa24.72■■□□□ 1.55
SSNA1-202ENST00000459860 GJB4Q9NTQ9 266 aa24.72■■□□□ 1.55
SSNA1-202ENST00000459860 KIF3AQ9Y496 699 aa24.72■■□□□ 1.55
SSNA1-202ENST00000459860 FAM86B1E9PN63 330 aa24.71■■□□□ 1.55
SSNA1-202ENST00000459860 M0R2N6 131 aa24.71■■□□□ 1.55
SSNA1-202ENST00000459860 ATP9AO75110 1047 aa24.71■■□□□ 1.55
SSNA1-202ENST00000459860 FAM86B2P0C5J1 330 aa24.71■■□□□ 1.55
SSNA1-202ENST00000459860 ZNF286BP0CG31 522 aa24.71■■□□□ 1.55
SSNA1-202ENST00000459860 HOXD8P13378 290 aaPredicted RBP24.71■■□□□ 1.55
SSNA1-202ENST00000459860 ITGB8P26012 769 aa24.71■■□□□ 1.55
SSNA1-202ENST00000459860 FOSBP53539 338 aa24.71■■□□□ 1.55
SSNA1-202ENST00000459860 TMX3Q96JJ7 454 aa24.71■■□□□ 1.55
SSNA1-202ENST00000459860 JPH1Q9HDC5 661 aaPredicted RBP24.71■■□□□ 1.55
SSNA1-202ENST00000459860 TCEAL9Q9UHQ7 104 aa24.71■■□□□ 1.55
SSNA1-202ENST00000459860 NFASCO94856 1347 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 F2P00734 622 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 ARP10275 920 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 CIITAP33076 1130 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 SAFBQ15424 915 aaKnown RBP eCLIP24.7■■□□□ 1.54
SSNA1-202ENST00000459860 NBPF20Q3BBV1 942 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 NFRKBQ6P4R8 1299 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 FAM126BQ8IXS8 530 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 C8orf76Q96K31 380 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 GPR20Q99678 358 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 BCAS3Q9H6U6 928 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 AGO4Q9HCK5 861 aaKnown RBP24.7■■□□□ 1.54
SSNA1-202ENST00000459860 TMEM39AQ9NV64 488 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 LTBP2Q14767 1821 aa24.7■■□□□ 1.54
SSNA1-202ENST00000459860 GRIN2DO15399 1336 aa24.69■■□□□ 1.54
SSNA1-202ENST00000459860 CD2BP2O95400 341 aaKnown RBP24.69■■□□□ 1.54
SSNA1-202ENST00000459860 MMP1P03956 469 aa24.69■■□□□ 1.54
SSNA1-202ENST00000459860 PSEN2P49810 448 aa24.69■■□□□ 1.54
SSNA1-202ENST00000459860 PTPN11Q06124 597 aaPredicted RBP24.69■■□□□ 1.54
SSNA1-202ENST00000459860 PRR16Q569H4 304 aa24.69■■□□□ 1.54
SSNA1-202ENST00000459860 KRT40Q6A162 431 aa24.69■■□□□ 1.54
SSNA1-202ENST00000459860 FAM161BQ96MY7 647 aa24.69■■□□□ 1.54
SSNA1-202ENST00000459860 ZNF577Q9BSK1 485 aa24.69■■□□□ 1.54
SSNA1-202ENST00000459860 SLC9A2Q9UBY0 812 aa24.69■■□□□ 1.54
SSNA1-202ENST00000459860 ZNF215Q9UL58 517 aaPredicted RBP24.69■■□□□ 1.54
SSNA1-202ENST00000459860 IGLV3-22A0A075B6J6 115 aa24.68■■□□□ 1.54
SSNA1-202ENST00000459860 LGALS2P05162 132 aa24.68■■□□□ 1.54
SSNA1-202ENST00000459860 FAAP100Q0VG06 881 aa24.68■■□□□ 1.54
SSNA1-202ENST00000459860 MFSD10Q14728 455 aa24.68■■□□□ 1.54
SSNA1-202ENST00000459860 IPO5O00410 1097 aaKnown RBP24.67■■□□□ 1.54
SSNA1-202ENST00000459860 SUPT20HL2P0C7V6 817 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms