RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.414e-35■■■□□ 18.4
DDX39B-214ENST00000458640 ITGB3BPQ13352 177 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-214ENST00000458640 TMEM67Q5HYA8 995 aa12.46□□□□□ -0.41
DDX39B-214ENST00000458640 ARMC3Q5W041 872 aa12.46□□□□□ -0.41
DDX39B-214ENST00000458640 LRIG3Q6UXM1 1119 aa12.46□□□□□ -0.41
DDX39B-214ENST00000458640 ANKS4BQ8N8V4 417 aa12.46□□□□□ -0.41
DDX39B-214ENST00000458640 VCXQ9H320 206 aa12.46□□□□□ -0.41
DDX39B-214ENST00000458640 DMAP1Q9NPF5 467 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-214ENST00000458640 DCP1AQ9NPI6 582 aaPredicted RBP12.46□□□□□ -0.41
DDX39B-214ENST00000458640 SLC12A4Q9UP95 1085 aa12.46□□□□□ -0.41
DDX39B-214ENST00000458640 HPSEQ9Y251 543 aa12.46□□□□□ -0.41
DDX39B-214ENST00000458640 SLX4Q8IY92 1834 aa12.46□□□□□ -0.42
DDX39B-214ENST00000458640 CCT8L1PA6NM43 557 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 CPLX1O14810 134 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 PFKFB1P16118 471 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 SYKP43405 635 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 PPP4CP60510 307 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 PAK2Q13177 524 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 BIRC3Q13489 604 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 ITIH4Q14624 930 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 RBM26Q5T8P6 1007 aaKnown RBP12.45□□□□□ -0.42
DDX39B-214ENST00000458640 CYB5R4Q7L1T6 521 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 SGMS1Q86VZ5 419 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 TMTC2Q8N394 836 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 NSUN7Q8NE18 718 aaKnown RBP12.45□□□□□ -0.42
DDX39B-214ENST00000458640 ZIM3Q96PE6 472 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 UBAC1Q9BSL1 405 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 LRRC42Q9Y546 428 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 PTPDC1A2A3K4 754 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 DIAPH2O60879 1101 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 GNAQP50148 359 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 ATP1A2P50993 1020 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 VAV2P52735 878 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 MYBPC3Q14896 1274 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 SBK1Q52WX2 424 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 PODNQ7Z5L7 613 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 ARHGAP18Q8N392 663 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 EIF1ADQ8N9N8 165 aaKnown RBP12.45□□□□□ -0.42
DDX39B-214ENST00000458640 SUPT20HQ8NEM7 779 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 SMCR8Q8TEV9 937 aaPredicted RBP12.45□□□□□ -0.42
DDX39B-214ENST00000458640 NAF1Q96HR8 494 aaKnown RBP12.45□□□□□ -0.42
DDX39B-214ENST00000458640 VCX3BQ9H321 246 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 VCX3AQ9NNX9 186 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 KCNMB3Q9NPA1 279 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 ZSWIM5Q9P217 1185 aa12.45□□□□□ -0.42
DDX39B-214ENST00000458640 PPP6R2O75170 966 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 E2F6O75461 281 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 GTF2IP78347 998 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 ZBED6P86452 979 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 PDE4BQ07343 736 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 RBL2Q08999 1139 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 DIXDC1Q155Q3 683 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 PABPC1LQ4VXU2 614 aaKnown RBP12.44□□□□□ -0.42
DDX39B-214ENST00000458640 SH2D4BQ5SQS7 431 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 NT5DC1Q5TFE4 455 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 DNAJC14Q6Y2X3 702 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-214ENST00000458640 RNF168Q8IYW5 571 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-214ENST00000458640 CCDC155Q8N6L0 562 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 MAIP1Q8WWC4 291 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 CENPTQ96BT3 561 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 OPTNQ96CV9 577 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-214ENST00000458640 RTFDC1Q9BY42 306 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-214ENST00000458640 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.44□□□□□ -0.423e-13■■□□□ 11.4
DDX39B-214ENST00000458640 CEP131Q9UPN4 1083 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 ZNF510Q9Y2H8 683 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 NFE2L3Q9Y4A8 694 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 SLC4A7Q9Y6M7 1214 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 KIF13BQ9NQT8 1826 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 USP17L21D6R901 530 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 CHRNA5P30532 468 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 CASP14P31944 242 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 METAP2P50579 478 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDX39B-214ENST00000458640 RCAN1P53805 252 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 SEC24CP53992 1094 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 WTAPQ15007 396 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 SLC4A8Q2Y0W8 1093 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 CAGE1Q8TC20 777 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 IGDCC4Q8TDY8 1250 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 AGAP11Q8TF27 550 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 JAKMIP2Q96AA8 810 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 FAM192AQ9GZU8 254 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 C2CD2Q9Y426 696 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 SLC12A7Q9Y666 1083 aa12.44□□□□□ -0.42
DDX39B-214ENST00000458640 CDK5RAP2Q96SN8 1893 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 GAKO14976 1311 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 DPPA5A6NC42 116 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 OPLAHO14841 1288 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 N4BP3O15049 544 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 ZBTB43O43298 467 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 KIF4AO95239 1232 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 FGRP09769 529 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 CCDC166P0CW27 439 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 ATP2A2P16615 1042 aaKnown RBP12.43□□□□□ -0.42
DDX39B-214ENST00000458640 BTDP43251 543 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 ZNF131P52739 623 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 KRT83P78385 493 aa12.43□□□□□ -0.42
DDX39B-214ENST00000458640 USP4Q13107 963 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms