RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CD4P01730 458 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 KCNA2P16389 499 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 MCM2P49736 904 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 PSEN2P49810 448 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 SETQ01105 290 aaPredicted RBP18.38■□□□□ 0.53
CD28-203ENST00000458610 SH3RF1Q7Z6J0 888 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 SESTD1Q86VW0 696 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 PLA2G4DQ86XP0 818 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 SEPT1Q8WYJ6 367 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 TRIM43Q96BQ3 446 aaPredicted RBP18.38■□□□□ 0.53
CD28-203ENST00000458610 TBC1D32Q96NH3 1257 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 GPR20Q99678 358 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 ZNF215Q9UL58 517 aaPredicted RBP18.38■□□□□ 0.53
CD28-203ENST00000458610 NOD1Q9Y239 953 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 BRCA2P51587 3418 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 ATP9AO75110 1047 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 LARGE1O95461 756 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 F2P00734 622 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 CIITAP33076 1130 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 MDM2Q00987 491 aaPredicted RBP18.37■□□□□ 0.53
CD28-203ENST00000458610 MFSD10Q14728 455 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 KIAA0753Q2KHM9 967 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 NSUN7Q8NE18 718 aaKnown RBP18.37■□□□□ 0.53
CD28-203ENST00000458610 RASGRP4Q8TDF6 673 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 CRYGNQ8WXF5 182 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 KAT2BQ92831 832 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 PHF20Q9BVI0 1012 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 BACH2Q9BYV9 841 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 JPH1Q9HDC5 661 aaPredicted RBP18.37■□□□□ 0.53
CD28-203ENST00000458610 TCEAL9Q9UHQ7 104 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 TBX21Q9UL17 535 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 NFASCO94856 1347 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 ALPK3Q96L96 1907 aa18.37■□□□□ 0.53
CD28-203ENST00000458610 CCDC194A0A1B0GVG4 234 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 H3BRB1 525 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 HMGN5P82970 282 aaKnown RBP18.36■□□□□ 0.53
CD28-203ENST00000458610 NONOQ15233 471 aaKnown RBP eCLIP18.36■□□□□ 0.53
CD28-203ENST00000458610 TMEM199Q8N511 208 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 CYP2W1Q8TAV3 490 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 BADQ92934 168 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 TNPO1Q92973 898 aaKnown RBP18.36■□□□□ 0.53
CD28-203ENST00000458610 AIFM3Q96NN9 605 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 C16orf70Q9BSU1 422 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 TRPV6Q9H1D0 765 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 TUT1Q9H6E5 874 aaKnown RBP18.36■□□□□ 0.53
CD28-203ENST00000458610 AGO4Q9HCK5 861 aaKnown RBP18.36■□□□□ 0.53
CD28-203ENST00000458610 TBC1D22BQ9NU19 505 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 PKD2L1Q9P0L9 805 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 SLC9A2Q9UBY0 812 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 KCNJ14Q9UNX9 436 aa18.36■□□□□ 0.53
CD28-203ENST00000458610 TNRC18O15417 2968 aaPredicted RBP18.35■□□□□ 0.53
CD28-203ENST00000458610 FAM86B1E9PN63 330 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 HAS3O00219 553 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 B4GALT4O60513 344 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 LGALS2P05162 132 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 FAM86B2P0C5J1 330 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 ZNF286BP0CG31 522 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 ARP10275 920 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 FDPSP14324 419 aaKnown RBP18.35■□□□□ 0.53
CD28-203ENST00000458610 SP4Q02446 784 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 MFSD5Q6N075 450 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 CCDC83Q8IWF9 413 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 CCDC155Q8N6L0 562 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 TBCKQ8TEA7 893 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 NAP1L4Q99733 375 aaKnown RBP18.35■□□□□ 0.53
CD28-203ENST00000458610 ZNF577Q9BSK1 485 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 PRO3102Q9H379 93 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 HIPK3Q9H422 1215 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 BCAS3Q9H6U6 928 aa18.35■□□□□ 0.53
CD28-203ENST00000458610 GNAT1P11488 350 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 TCF7P36402 384 aaPredicted RBP18.34■□□□□ 0.53
CD28-203ENST00000458610 FPGSQ05932 587 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 PPIGQ13427 754 aaKnown RBP eCLIP18.34■□□□□ 0.53
CD28-203ENST00000458610 BFSP2Q13515 415 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 SAFBQ15424 915 aaKnown RBP eCLIP18.34■□□□□ 0.53
CD28-203ENST00000458610 PTGISQ16647 500 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 PRR16Q569H4 304 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 HABP4Q5JVS0 413 aaKnown RBP18.34■□□□□ 0.53
CD28-203ENST00000458610 UTP14CQ5TAP6 766 aaKnown RBP18.34■□□□□ 0.53
CD28-203ENST00000458610 FAM184AQ8NB25 1140 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 RETREG2Q8NC44 543 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 SMARCAD1Q9H4L7 1026 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 AZI2Q9H6S1 392 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 TRMT13Q9NUP7 481 aaKnown RBP18.34■□□□□ 0.53
CD28-203ENST00000458610 KIF3AQ9Y496 699 aa18.34■□□□□ 0.53
CD28-203ENST00000458610 IGLV3-22A0A075B6J6 115 aa18.33■□□□□ 0.52
CD28-203ENST00000458610 M0R2N6 131 aa18.33■□□□□ 0.52
CD28-203ENST00000458610 IPO5O00410 1097 aaKnown RBP18.33■□□□□ 0.52
CD28-203ENST00000458610 ADAMTS3O15072 1205 aa18.33■□□□□ 0.52
CD28-203ENST00000458610 KRT2P35908 639 aa18.33■□□□□ 0.52
CD28-203ENST00000458610 MOXD1Q6UVY6 613 aa18.33■□□□□ 0.52
CD28-203ENST00000458610 GLG1Q92896 1179 aa18.33■□□□□ 0.52
CD28-203ENST00000458610 ERAP1Q9NZ08 941 aa18.33■□□□□ 0.52
CD28-203ENST00000458610 HDAC6Q9UBN7 1215 aa18.33■□□□□ 0.52
CD28-203ENST00000458610 GTF2IRD1Q9UHL9 959 aa18.33■□□□□ 0.52
CD28-203ENST00000458610 GSTTP1A0A1W2PQM5 241 aa18.32■□□□□ 0.52
CD28-203ENST00000458610 JAK2O60674 1132 aa18.32■□□□□ 0.52
CD28-203ENST00000458610 NPY5RQ15761 445 aa18.32■□□□□ 0.52
CD28-203ENST00000458610 RPUSD2Q8IZ73 545 aaKnown RBP18.32■□□□□ 0.52
CD28-203ENST00000458610 TDHQ8IZJ6 230 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms