RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 TECP42680 631 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 TRAPPC10P48553 1259 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 GRIN1Q05586 938 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 PWP2Q15269 919 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 CALCRLQ16602 461 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 DHX37Q8IY37 1157 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 OR6J1Q8NGC5 347 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 ETNPPLQ8TBG4 499 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 PPP1R13LQ8WUF5 828 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 TNPO1Q92973 898 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 ZNF396Q96N95 335 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 DEFB118Q96PH6 123 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 MTMR9Q96QG7 549 aa9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 DDX20Q9UHI6 824 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 CIZ1Q9ULV3 898 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-204ENST00000458188 SEPT4O43236 478 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 GAS7O60861 476 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 BAG4O95429 457 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 CCNE2O96020 404 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 OR52Z1P0C646 297 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 PDIA4P13667 645 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 GCFC2P16383 781 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 CHMP4BP1P59074 171 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 ARHGAP1Q07960 439 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 STK38Q15208 465 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 PTPAQ15257 358 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 HSDL1Q3SXM5 330 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 DUSP28Q4G0W2 176 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 SPECC1Q5M775 1068 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 CELF3Q5SZQ8 465 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 LRCH2Q5VUJ6 765 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 LHX8Q68G74 356 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 NCAPH2Q6IBW4 605 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 MOXD1Q6UVY6 613 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 NIPA1Q7RTP0 329 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 TRMT1LQ7Z2T5 733 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 AFG1LQ8WV93 481 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 SLC5A5Q92911 643 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 ZNF333Q96JL9 665 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 SPATA33Q96N06 139 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 CLIC6Q96NY7 704 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 NAP1L4Q99733 375 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 SDF4Q9BRK5 362 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 UNC45AQ9H3U1 944 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 TTC12Q9H892 705 aaPredicted RBP9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 KCNMB3Q9NPA1 279 aa9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 GNEQ9Y223 722 aaKnown RBP9.81□□□□□ -0.84
CLTCL1-204ENST00000458188 CENPFP49454 3210 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 A0A087WWV3 80 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 VWA3AA6NCI4 1184 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 PP2D1A8MPX8 630 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 EML1O00423 815 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 MAFGO15525 162 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 PSMD10O75832 226 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 FARP2O94887 1054 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 GH1P01241 217 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 C6orf222P0C671 652 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 RARBP10826 455 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 CDC25AP30304 524 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 SETQ01105 290 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 NEDD9Q14511 834 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 UTP14CQ5TAP6 766 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 KCNV1Q6PIU1 500 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 TLK2Q86UE8 772 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 CDHR1Q96JP9 859 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 TEKT3Q9BXF9 490 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 AP5M1Q9H0R1 490 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 JPH1Q9HDC5 661 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 XPNPEP3Q9NQH7 507 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 SLC9A2Q9UBY0 812 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 NRBP1Q9UHY1 535 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 PCDHA12Q9UN75 941 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 SAMM50Q9Y512 469 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 DOCK3Q8IZD9 2030 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 LCTP09848 1927 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 MYH6P13533 1939 aa9.8□□□□□ -0.84
CLTCL1-204ENST00000458188 GSTTP1A0A1W2PQM5 241 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 POTEMA6NI47 508 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 SPTLC2O15270 562 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 CTAGE5O15320 804 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 DUSP11O75319 330 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 TFRCP02786 760 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 MYL3P08590 195 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 TGFB3P10600 412 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 NASPP49321 788 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 ACTR2P61160 394 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 ATP2C1P98194 919 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 LAMC2Q13753 1193 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 SLC39A14Q15043 492 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 ZRSR1Q15695 479 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 GNASQ5JWF2 1037 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 DTHD1Q6ZMT9 781 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 LINC00301Q8NCQ3 95 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 FAM20AQ96MK3 541 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 PLIN2Q99541 437 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 GPR20Q99678 358 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 SENP7Q9BQF6 1050 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 HTATIP2Q9BUP3 242 aa9.79□□□□□ -0.84
CLTCL1-204ENST00000458188 TBC1D22BQ9NU19 505 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms