RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 GH1P01241 217 aa19.21■□□□□ 0.67
SF3B4-202ENST00000457312 CTSHP09668 335 aa19.21■□□□□ 0.67
SF3B4-202ENST00000457312 DMWDQ09019 674 aa19.21■□□□□ 0.67
SF3B4-202ENST00000457312 COL9A3Q14050 684 aaPredicted RBP19.21■□□□□ 0.67
SF3B4-202ENST00000457312 TTF1Q15361 905 aaPredicted RBP19.21■□□□□ 0.67
SF3B4-202ENST00000457312 SLFNL1Q499Z3 407 aa19.21■□□□□ 0.67
SF3B4-202ENST00000457312 DHX37Q8IY37 1157 aaKnown RBP19.21■□□□□ 0.67
SF3B4-202ENST00000457312 RTKNQ9BST9 563 aa19.21■□□□□ 0.67
SF3B4-202ENST00000457312 NOB1Q9ULX3 412 aaKnown RBP19.21■□□□□ 0.67
SF3B4-202ENST00000457312 GCN1Q92616 2671 aaKnown RBP19.21■□□□□ 0.67
SF3B4-202ENST00000457312 DENND4AQ7Z401 1863 aa19.2■□□□□ 0.66
SF3B4-202ENST00000457312 FSD2A1L4K1 749 aa19.2■□□□□ 0.66
SF3B4-202ENST00000457312 PTPDC1A2A3K4 754 aa19.2■□□□□ 0.66
SF3B4-202ENST00000457312 KCNC3Q14003 757 aa19.2■□□□□ 0.66
SF3B4-202ENST00000457312 TMEM184AQ6ZMB5 413 aa19.2■□□□□ 0.66
SF3B4-202ENST00000457312 CHST3Q7LGC8 479 aa19.2■□□□□ 0.66
SF3B4-202ENST00000457312 CDCA3Q99618 268 aaPredicted RBP19.2■□□□□ 0.66
SF3B4-202ENST00000457312 POMKQ9H5K3 350 aa19.2■□□□□ 0.66
SF3B4-202ENST00000457312 MTMR4Q9NYA4 1195 aa19.2■□□□□ 0.66
SF3B4-202ENST00000457312 ICAM1P05362 532 aa19.19■□□□□ 0.66
SF3B4-202ENST00000457312 CALML3P27482 149 aa19.19■□□□□ 0.66
SF3B4-202ENST00000457312 TECP42680 631 aa19.19■□□□□ 0.66
SF3B4-202ENST00000457312 POLA2Q14181 598 aa19.19■□□□□ 0.66
SF3B4-202ENST00000457312 LY6KQ17RY6 165 aa19.19■□□□□ 0.66
SF3B4-202ENST00000457312 GMCL1Q96IK5 515 aa19.19■□□□□ 0.66
SF3B4-202ENST00000457312 PRR12Q9ULL5 1215 aa19.19■□□□□ 0.66
SF3B4-202ENST00000457312 PLA2G6O60733 806 aa19.18■□□□□ 0.66
SF3B4-202ENST00000457312 DGKIO75912 1065 aa19.18■□□□□ 0.66
SF3B4-202ENST00000457312 TTLL1O95922 423 aa19.18■□□□□ 0.66
SF3B4-202ENST00000457312 GNAI2P04899 355 aa19.18■□□□□ 0.66
SF3B4-202ENST00000457312 STK11IPQ8N1F8 1099 aa19.18■□□□□ 0.66
SF3B4-202ENST00000457312 CHMP4CQ96CF2 233 aa19.18■□□□□ 0.66
SF3B4-202ENST00000457312 ERVK-5Q9HDB9 667 aa19.18■□□□□ 0.66
SF3B4-202ENST00000457312 ARPP21Q9UBL0 812 aaPredicted RBP19.18■□□□□ 0.66
SF3B4-202ENST00000457312 ASH1LQ9NR48 2969 aaKnown RBP19.18■□□□□ 0.66
SF3B4-202ENST00000457312 PRR5-ARHGAP8B1AHC4 643 aa19.17■□□□□ 0.66
SF3B4-202ENST00000457312 CAND2O75155 1236 aa19.17■□□□□ 0.66
SF3B4-202ENST00000457312 SRGAP2BP0DMP2 458 aa19.17■□□□□ 0.66
SF3B4-202ENST00000457312 SLC1A4P43007 532 aa19.17■□□□□ 0.66
SF3B4-202ENST00000457312 ARHGAP8P85298 464 aa19.17■□□□□ 0.66
SF3B4-202ENST00000457312 DDRGK1Q96HY6 314 aa19.17■□□□□ 0.66
SF3B4-202ENST00000457312 MPHOSPH6Q99547 160 aaKnown RBP19.17■□□□□ 0.66
SF3B4-202ENST00000457312 SP9P0CG40 484 aa19.16■□□□□ 0.66
SF3B4-202ENST00000457312 HOXC8P31273 242 aa19.16■□□□□ 0.66
SF3B4-202ENST00000457312 LMNB2Q03252 620 aa19.16■□□□□ 0.66
SF3B4-202ENST00000457312 RASGRP2Q7LDG7 609 aa19.16■□□□□ 0.66
SF3B4-202ENST00000457312 CMTR2Q8IYT2 770 aaKnown RBP19.16■□□□□ 0.66
SF3B4-202ENST00000457312 MKNK2Q9HBH9 465 aa19.16■□□□□ 0.66
SF3B4-202ENST00000457312 IGF2RP11717 2491 aa19.16■□□□□ 0.66
SF3B4-202ENST00000457312 PLIN4Q96Q06 1357 aa19.16■□□□□ 0.66
SF3B4-202ENST00000457312 SURF6O75683 361 aaKnown RBP19.15■□□□□ 0.66
SF3B4-202ENST00000457312 PPM1JQ5JR12 505 aa19.15■□□□□ 0.66
SF3B4-202ENST00000457312 KCTD1Q719H9 257 aa19.15■□□□□ 0.66
SF3B4-202ENST00000457312 ZDHHC14Q8IZN3 488 aa19.15■□□□□ 0.66
SF3B4-202ENST00000457312 SIX5Q8N196 739 aa19.15■□□□□ 0.66
SF3B4-202ENST00000457312 TDRD5Q8NAT2 981 aaKnown RBP19.15■□□□□ 0.66
SF3B4-202ENST00000457312 DNERQ8NFT8 737 aa19.15■□□□□ 0.66
SF3B4-202ENST00000457312 NCDNQ9UBB6 729 aa19.15■□□□□ 0.66
SF3B4-202ENST00000457312 LIMD1Q9UGP4 676 aa19.15■□□□□ 0.66
SF3B4-202ENST00000457312 SLC4A4Q9Y6R1 1079 aa19.15■□□□□ 0.66
SF3B4-202ENST00000457312 HOXD8P13378 290 aaPredicted RBP19.14■□□□□ 0.65
SF3B4-202ENST00000457312 MCCP23508 829 aa19.14■□□□□ 0.65
SF3B4-202ENST00000457312 RPS6P62753 249 aaKnown RBP19.14■□□□□ 0.65
SF3B4-202ENST00000457312 RNF207Q6ZRF8 634 aa19.14■□□□□ 0.65
SF3B4-202ENST00000457312 GPR161Q8N6U8 529 aaKnown RBP19.14■□□□□ 0.65
SF3B4-202ENST00000457312 PPTC7Q8NI37 304 aa19.14■□□□□ 0.65
SF3B4-202ENST00000457312 MICAL1Q8TDZ2 1067 aa19.14■□□□□ 0.65
SF3B4-202ENST00000457312 CLEC4DQ8WXI8 215 aa19.14■□□□□ 0.65
SF3B4-202ENST00000457312 ATP6V0A1Q93050 837 aa19.14■□□□□ 0.65
SF3B4-202ENST00000457312 EMID1Q96A84 441 aaPredicted RBP19.14■□□□□ 0.65
SF3B4-202ENST00000457312 NECTIN4Q96NY8 510 aa19.14■□□□□ 0.65
SF3B4-202ENST00000457312 RANBP17Q9H2T7 1088 aaKnown RBP19.14■□□□□ 0.65
SF3B4-202ENST00000457312 SOBPA7XYQ1 873 aa19.13■□□□□ 0.65
SF3B4-202ENST00000457312 GOLIM4O00461 696 aa19.13■□□□□ 0.65
SF3B4-202ENST00000457312 HOXB8P17481 243 aaPredicted RBP19.13■□□□□ 0.65
SF3B4-202ENST00000457312 ADD2P35612 726 aa19.13■□□□□ 0.65
SF3B4-202ENST00000457312 VARS2Q5ST30 1063 aaKnown RBP19.13■□□□□ 0.65
SF3B4-202ENST00000457312 LLGL2Q6P1M3 1020 aa19.13■□□□□ 0.65
SF3B4-202ENST00000457312 SEPT14Q6ZU15 432 aa19.13■□□□□ 0.65
SF3B4-202ENST00000457312 RASGRP4Q8TDF6 673 aa19.13■□□□□ 0.65
SF3B4-202ENST00000457312 SSH3Q8TE77 659 aa19.13■□□□□ 0.65
SF3B4-202ENST00000457312 C17orf102A2RUQ5 167 aa19.12■□□□□ 0.65
SF3B4-202ENST00000457312 FSCN2O14926 492 aa19.12■□□□□ 0.65
SF3B4-202ENST00000457312 TREHO43280 583 aa19.12■□□□□ 0.65
SF3B4-202ENST00000457312 CHGBP05060 677 aa19.12■□□□□ 0.65
SF3B4-202ENST00000457312 FNDC1Q4ZHG4 1894 aaPredicted RBP19.11■□□□□ 0.65
SF3B4-202ENST00000457312 KINO60870 393 aaKnown RBP19.11■□□□□ 0.65
SF3B4-202ENST00000457312 PPFIA3O75145 1194 aa19.11■□□□□ 0.65
SF3B4-202ENST00000457312 PRDM1O75626 825 aa19.11■□□□□ 0.65
SF3B4-202ENST00000457312 ERVFC1P60507 584 aa19.11■□□□□ 0.65
SF3B4-202ENST00000457312 UBE3AQ05086 875 aa19.11■□□□□ 0.65
SF3B4-202ENST00000457312 PAN2Q504Q3 1202 aaKnown RBP19.11■□□□□ 0.65
SF3B4-202ENST00000457312 SBK1Q52WX2 424 aa19.11■□□□□ 0.65
SF3B4-202ENST00000457312 DNAJC2Q99543 621 aaKnown RBP19.11■□□□□ 0.65
SF3B4-202ENST00000457312 RNF216Q9NWF9 866 aaPredicted RBP19.11■□□□□ 0.65
SF3B4-202ENST00000457312 FBXL21Q9UKT6 434 aa19.11■□□□□ 0.65
SF3B4-202ENST00000457312 ANGPTL2Q9UKU9 493 aa19.11■□□□□ 0.65
SF3B4-202ENST00000457312 DUSP12Q9UNI6 340 aa19.11■□□□□ 0.65
SF3B4-202ENST00000457312 NOP58Q9Y2X3 529 aaKnown RBP19.11■□□□□ 0.65
SF3B4-202ENST00000457312 LOXHD1Q8IVV2 1947 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms