RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 UTP14CQ5TAP6 766 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-215ENST00000456545 KAT2BQ92831 832 aa20.62■□□□□ 0.89
PDLIM2-215ENST00000456545 IL17RAQ96F46 866 aa20.62■□□□□ 0.89
PDLIM2-215ENST00000456545 C22orf23Q9BZE7 217 aa20.62■□□□□ 0.89
PDLIM2-215ENST00000456545 ATP9AO75110 1047 aa20.61■□□□□ 0.89
PDLIM2-215ENST00000456545 CYP2C9P11712 490 aa20.61■□□□□ 0.89
PDLIM2-215ENST00000456545 SREBF1P36956 1147 aa20.61■□□□□ 0.89
PDLIM2-215ENST00000456545 PPIGQ13427 754 aaKnown RBP eCLIP20.61■□□□□ 0.89
PDLIM2-215ENST00000456545 PTGISQ16647 500 aa20.61■□□□□ 0.89
PDLIM2-215ENST00000456545 CEP55Q53EZ4 464 aa20.61■□□□□ 0.89
PDLIM2-215ENST00000456545 RETREG2Q8NC44 543 aa20.61■□□□□ 0.89
PDLIM2-215ENST00000456545 SDF4Q9BRK5 362 aa20.61■□□□□ 0.89
PDLIM2-215ENST00000456545 H3BRB1 525 aa20.6■□□□□ 0.89
PDLIM2-215ENST00000456545 FXR1P51114 621 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDLIM2-215ENST00000456545 NECAB1Q8N987 351 aa20.6■□□□□ 0.89
PDLIM2-215ENST00000456545 WASF1Q92558 559 aa20.6■□□□□ 0.89
PDLIM2-215ENST00000456545 GPR20Q99678 358 aa20.6■□□□□ 0.89
PDLIM2-215ENST00000456545 TUT1Q9H6E5 874 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-215ENST00000456545 KCNH7Q9NS40 1196 aa20.6■□□□□ 0.89
PDLIM2-215ENST00000456545 HDAC6Q9UBN7 1215 aa20.6■□□□□ 0.89
PDLIM2-215ENST00000456545 LTBP2Q14767 1821 aa20.6■□□□□ 0.89
PDLIM2-215ENST00000456545 SCN10AQ9Y5Y9 1956 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 F2P00734 622 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 LGALS2P05162 132 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 KCNA2P16389 499 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 CCL23P55773 120 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 SHHQ15465 462 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 ME3Q16798 604 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 PLA2G4DQ86XP0 818 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 CYP2W1Q8TAV3 490 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 RASGRP4Q8TDF6 673 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 SEPT1Q8WYJ6 367 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 NOC4LQ9BVI4 516 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 ZNF215Q9UL58 517 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 PCDHA4Q9UN74 947 aa20.59■□□□□ 0.89
PDLIM2-215ENST00000456545 DOCK5Q9H7D0 1870 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 ARP10275 920 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 HOXD8P13378 290 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 CSF2RAP15509 400 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 BFSP2Q13515 415 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 GALNT17Q6IS24 598 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 GDF6Q6KF10 455 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 SESTD1Q86VW0 696 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 BLIDQ8IZY5 108 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 CCDC155Q8N6L0 562 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 C16orf70Q9BSU1 422 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 ORC3Q9UBD5 711 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 GTF2IRD1Q9UHL9 959 aa20.58■□□□□ 0.89
PDLIM2-215ENST00000456545 HAS3O00219 553 aa20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 MEIS1O00470 390 aa20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 CYP3A4P08684 503 aa20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 TCF7P36402 384 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 C9orf50Q5SZB4 431 aa20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 NIPA1Q7RTP0 329 aa20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 RPUSD2Q8IZ73 545 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 FAM177A1Q8N128 213 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 GLG1Q92896 1179 aa20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 RNPC3Q96LT9 517 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 AIFM3Q96NN9 605 aa20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 JPH1Q9HDC5 661 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 SLC9A2Q9UBY0 812 aa20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 LIMCH1Q9UPQ0 1083 aa20.57■□□□□ 0.88
PDLIM2-215ENST00000456545 UMODL1Q5DID0 1318 aa20.56■□□□□ 0.88
PDLIM2-215ENST00000456545 STK36Q9NRP7 1315 aa20.56■□□□□ 0.88
PDLIM2-215ENST00000456545 ADAMTS3O15072 1205 aa20.56■□□□□ 0.88
PDLIM2-215ENST00000456545 LRIT3Q3SXY7 679 aa20.56■□□□□ 0.88
PDLIM2-215ENST00000456545 GTF3C6Q969F1 213 aa20.56■□□□□ 0.88
PDLIM2-215ENST00000456545 AGO4Q9HCK5 861 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-215ENST00000456545 TCEAL9Q9UHQ7 104 aa20.56■□□□□ 0.88
PDLIM2-215ENST00000456545 KCNJ14Q9UNX9 436 aa20.56■□□□□ 0.88
PDLIM2-215ENST00000456545 C17orf102A2RUQ5 167 aa20.55■□□□□ 0.88
PDLIM2-215ENST00000456545 DTNBO60941 627 aa20.55■□□□□ 0.88
PDLIM2-215ENST00000456545 ACRP10323 421 aa20.55■□□□□ 0.88
PDLIM2-215ENST00000456545 GNAT1P11488 350 aa20.55■□□□□ 0.88
PDLIM2-215ENST00000456545 EPHB4P54760 987 aa20.55■□□□□ 0.88
PDLIM2-215ENST00000456545 AZI2Q9H6S1 392 aa20.55■□□□□ 0.88
PDLIM2-215ENST00000456545 IL23AQ9NPF7 189 aa20.55■□□□□ 0.88
PDLIM2-215ENST00000456545 NFASCO94856 1347 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 GSTTP1A0A1W2PQM5 241 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 FAM86B1E9PN63 330 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 DDX39AO00148 427 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 LARGE1O95461 756 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 FGBP02675 491 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 FAM86B2P0C5J1 330 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 SMIM10L2AP0DMW4 78 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 SMIM10L2BP0DMW5 78 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 USP11P51784 963 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 SETQ01105 290 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 PRR16Q569H4 304 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 PSRC1Q6PGN9 363 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 CAGE1Q8TC20 777 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 ATP6V0A1Q93050 837 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 SCLYQ96I15 445 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 ZSCAN31Q96LW9 406 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 UIMC1Q96RL1 719 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 ZNF577Q9BSK1 485 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 SMARCAD1Q9H4L7 1026 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 TELO2Q9Y4R8 837 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 TRIOBPQ9H2D6 2365 aa20.54■□□□□ 0.88
PDLIM2-215ENST00000456545 CCDC194A0A1B0GVG4 234 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms