RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 C15orf41Q9Y2V0 281 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 COL4A3BPQ9Y5P4 624 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 IQANK1A0A1B0GTG1 560 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 EXOC1LA0A1B0GW35 172 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 SSU72P8A0A1W2PR75 194 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 STRNO43815 780 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 FTCDO95954 541 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 APOEP02649 317 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 MT-ND3P03897 115 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 MCF2P10911 925 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 PECAM1P16284 738 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CA4P22748 312 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 MARK3P27448 753 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CXCR5P32302 372 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 GARSP41250 739 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 BPIFB4P59827 614 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 KRT39Q6A163 491 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 TRMT10CQ7L0Y3 403 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 SPDYE1Q8NFV5 336 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 KCNV2Q8TDN2 545 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 OPTNQ96CV9 577 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 NAF1Q96HR8 494 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 CATSPER2Q96P56 530 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 TGS1Q96RS0 853 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 FOXP3Q9BZS1 431 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 SMG5Q9UPR3 1016 aaKnown RBP5.41□□□□□ -1.54
PCDH9-203ENST00000456367 TRAF3IP3Q9Y228 551 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ZNF711Q9Y462 761 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 PITPNM2Q9BZ72 1349 aa5.41□□□□□ -1.54
PCDH9-203ENST00000456367 ACTN1P12814 892 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 SCG2P13521 617 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 KRT5P13647 590 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 TXKP42681 527 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 CYP27A1Q02318 531 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 AP1B1Q10567 949 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 FSCBQ5H9T9 825 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 KLC3Q6P597 504 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 TOM1L2Q6ZVM7 507 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 SYDE1Q6ZW31 735 aaPredicted RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 BZW1Q7L1Q6 419 aaKnown RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 EIF1ADQ8N9N8 165 aaKnown RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 ZIM3Q96PE6 472 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 LRRC1Q9BTT6 524 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 MXD3Q9BW11 206 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 TRAIPQ9BWF2 469 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 VPS54Q9P1Q0 977 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 USP42Q9H9J4 1324 aaKnown RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 ATP10AO60312 1499 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 H0Y3Z8 333 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 RNMTO43148 476 aaKnown RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 TTI1O43156 1089 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 DKC1O60832 514 aaKnown RBP eCLIP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 SRGAP2O75044 1071 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 ATP6V1G2O95670 118 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 FGAP02671 866 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 NEK2P51955 445 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 HDAC4P56524 1084 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 TIMM10P62072 90 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 PSMD6Q15008 389 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 TMED2Q15363 201 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 PUM3Q15397 648 aaKnown RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 CDC37Q16543 378 aaPredicted RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 RARS2Q5T160 578 aaKnown RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 CCDC80Q76M96 950 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 EPM2AIP1Q7L775 607 aaPredicted RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 TRAPPC11Q7Z392 1133 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 USHBP1Q8N6Y0 703 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 HELBQ8NG08 1087 aaPredicted RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 RSAD2Q8WXG1 361 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 CDKL2Q92772 493 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 ZKSCAN4Q969J2 545 aaPredicted RBP5.4□□□□□ -1.54
PCDH9-203ENST00000456367 TRAPPC9Q96Q05 1148 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 ISCUQ9H1K1 167 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 DCLRE1BQ9H816 532 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 PFDN4Q9NQP4 134 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 ZC4H2Q9NQZ6 224 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 DLGAP2Q9P1A6 1054 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 FBXL5Q9UKA1 691 aa5.4□□□□□ -1.54
PCDH9-203ENST00000456367 ASAP2O43150 1006 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 PALMO75781 387 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 GFPT2O94808 682 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 AFPP02771 609 aaKnown RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 KRT3P12035 628 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 BRAFP15056 766 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 HSPA13P48723 471 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 ADAM9Q13443 819 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 STAT4Q14765 748 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 SGO2Q562F6 1265 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 PAPD7Q5XG87 772 aaKnown RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 RINLQ6ZS11 566 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 WDR75Q8IWA0 830 aaKnown RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 CCT6BQ92526 530 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 RNPC3Q96LT9 517 aaKnown RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 TRIM15Q9C019 465 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 MRPL44Q9H9J2 332 aaKnown RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 TMOD2Q9NZR1 351 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 ADD3Q9UEY8 706 aaKnown RBP5.4□□□□□ -1.55
PCDH9-203ENST00000456367 SEPT3Q9UH03 358 aa5.4□□□□□ -1.55
PCDH9-203ENST00000456367 DENND2AQ9ULE3 1009 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms