RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 OR6B1O95007 311 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 IFIT1P09914 478 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 TPBGLP0DKB5 382 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 BPIFB4P59827 614 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 ELOA2Q8IYF1 753 aaPredicted RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 HOOK2Q96ED9 719 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 C12orf65Q9H3J6 166 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 KANSL3Q9P2N6 904 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 NINQ8N4C6 2090 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 RNF113AO15541 343 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 TTI1O43156 1089 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 SNX3O60493 162 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 TRIM37O94972 964 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 PDHA1P08559 390 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 FOXN2P32314 431 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 HSPA9P38646 679 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 SLCO1A2P46721 670 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 MARCKSL1P49006 195 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 GIT2Q14161 759 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 MYBPC3Q14896 1274 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF568Q3ZCX4 644 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 CPNE9Q8IYJ1 553 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 TRIM51Q9BSJ1 452 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 FGFR1OP2Q9NVK5 253 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 ASAP1Q9ULH1 1129 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 C2CD2Q9Y426 696 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 DIP2CQ9Y2E4 1556 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 CCT8L1PA6NM43 557 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 LRRC53A6NM62 1247 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 CBFA2T2O43439 604 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 SNUPNO95149 360 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 RFC5P40937 340 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 KIF11P52732 1056 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 ENOX2Q16206 610 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 GLE1Q53GS7 698 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 CYP26C1Q6V0L0 522 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 EXOC3L1Q86VI1 746 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 POTEDQ86YR6 584 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 VGLL2Q8N8G2 317 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 CNBD1Q8NA66 436 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 GIMAP7Q8NHV1 300 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 NELFBQ8WX92 580 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 MXD3Q9BW11 206 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 NAA15Q9BXJ9 866 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 GBP3Q9H0R5 595 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 ZBTB3Q9H5J0 574 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 TAF1DQ9H5J8 278 aaPredicted RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 MAGEC2Q9UBF1 373 aaPredicted RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 FLT1P17948 1338 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 H0Y3Z8 333 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 IGF2BP3O00425 579 aaKnown RBP eCLIP5□□□□□ -1.61
DEPDC1-202ENST00000456315 ZBTB43O43298 467 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 AKR1B10O60218 316 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 CTNND1O60716 968 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 NEK3P51956 506 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 EPHB4P54760 987 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 ADCY1Q08828 1119 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 WASHC4Q2M389 1173 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 TMC3Q7Z5M5 1100 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 GALNT15Q8N3T1 639 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 MAGEC3Q8TD91 643 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 SDR42E1Q8WUS8 393 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 POP1Q99575 1024 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 TRIM31Q9BZY9 425 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 OSGEPQ9NPF4 335 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 ZDHHC18Q9NUE0 388 aa5□□□□□ -1.61
DEPDC1-202ENST00000456315 PDS5AQ29RF7 1337 aaKnown RBP5□□□□□ -1.61
DEPDC1-202ENST00000456315 ALDH1B1P30837 517 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 GNAQP50148 359 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 RWDD2BP57060 319 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SLC8A3P57103 927 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 CD300CQ08708 224 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 TNIP1Q15025 636 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SNCBQ16143 134 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 KHDC1Q4VXA5 237 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 TNFAIP8L3Q5GJ75 292 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 MTHFD1LQ6UB35 978 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SLC30A10Q6XR72 485 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 LRRC55Q6ZSA7 311 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 TICAM2Q86XR7 235 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 CD302Q8IX05 232 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SRBD1Q8N5C6 995 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF513Q8N8E2 541 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 TTC8Q8TAM2 541 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 AZIN2Q96A70 460 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SAAL1Q96ER3 474 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 AATFQ9NY61 560 aaKnown RBP eCLIP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ARPP21Q9UBL0 812 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 IQSEC3Q9UPP2 1182 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SLC4A4Q9Y6R1 1079 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 V9GY48 417 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 PALMO75781 387 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 GNA14O95837 355 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 HOXB7P09629 217 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 KCNA6P17658 529 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 GNAZP19086 355 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 IGHMBP2P38935 993 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 STAT6P42226 847 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 CTCFP49711 727 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ITIH3Q06033 890 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms