RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 PLIN4Q96Q06 1357 aa19.51■□□□□ 0.71
PTPN6-204ENST00000456013 GNA14O95837 355 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 RHBDL3P58872 404 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 APBA1Q02410 837 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 POLR2FP61218 127 aaKnown RBP19.5■□□□□ 0.71
PTPN6-204ENST00000456013 PAK2Q13177 524 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 SLC18A3Q16572 532 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 SKIDA1Q1XH10 827 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 MEI1Q5TIA1 1274 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 PPP1R18Q6NYC8 613 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 TADA2BQ86TJ2 420 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 TRIM59Q8IWR1 403 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 GPR101Q96P66 508 aaPredicted RBP19.5■□□□□ 0.71
PTPN6-204ENST00000456013 EHD4Q9H223 541 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 PCDHGC5Q9Y5F6 944 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 ARFGEF1Q9Y6D6 1849 aa19.5■□□□□ 0.71
PTPN6-204ENST00000456013 SHTN1A0MZ66 631 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 GNPATO15228 680 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 HEXIM1O94992 359 aaKnown RBP19.49■□□□□ 0.71
PTPN6-204ENST00000456013 SNHG28P0DPA3 235 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 KLRC1P26715 233 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 TNNI2P48788 182 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 CARSP49589 748 aaKnown RBP19.49■□□□□ 0.71
PTPN6-204ENST00000456013 HYIQ5T013 277 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 IQCKQ8N0W5 287 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 MREGQ8N565 214 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 HAS1Q92839 578 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 FAM163AQ96GL9 167 aaPredicted RBP19.49■□□□□ 0.71
PTPN6-204ENST00000456013 CD209Q9NNX6 404 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 MTMR4Q9NYA4 1195 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 MYH4Q9Y623 1939 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 CLK2P49760 499 aaKnown RBP19.49■□□□□ 0.71
PTPN6-204ENST00000456013 TBC1D5Q92609 795 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 EPB41L5Q9HCM4 733 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 BMP2KQ9NSY1 1161 aaPredicted RBP19.49■□□□□ 0.71
PTPN6-204ENST00000456013 AIPL1Q9NZN9 384 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 DDX25Q9UHL0 483 aaKnown RBP19.49■□□□□ 0.71
PTPN6-204ENST00000456013 NFU1Q9UMS0 254 aa19.49■□□□□ 0.71
PTPN6-204ENST00000456013 NT5C3AQ9H0P0 336 aa19.48■□□□□ 0.71
PTPN6-204ENST00000456013 PCDHA2Q9Y5H9 948 aa19.48■□□□□ 0.71
PTPN6-204ENST00000456013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.48■□□□□ 0.71
PTPN6-204ENST00000456013 KDM3AQ9Y4C1 1321 aa19.48■□□□□ 0.71
PTPN6-204ENST00000456013 KIF13BQ9NQT8 1826 aa19.48■□□□□ 0.71
PTPN6-204ENST00000456013 FTCDO95954 541 aa19.48■□□□□ 0.71
PTPN6-204ENST00000456013 GUCY2DQ02846 1103 aa19.48■□□□□ 0.71
PTPN6-204ENST00000456013 CFAP58Q5T655 872 aa19.48■□□□□ 0.71
PTPN6-204ENST00000456013 CCDC43Q96MW1 224 aaKnown RBP19.48■□□□□ 0.71
PTPN6-204ENST00000456013 INPP4AQ96PE3 977 aaPredicted RBP19.48■□□□□ 0.71
PTPN6-204ENST00000456013 FAM169AQ9Y6X4 670 aa19.48■□□□□ 0.71
PTPN6-204ENST00000456013 PNMA6FA0A0J9YX94 578 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 FAM153BP0C7A2 387 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 IL1R1P14778 569 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 FAM153CQ494X1 144 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 CD302Q8IX05 232 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 CCDC65Q8IXS2 484 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 FGFBP2Q9BYJ0 223 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 FAM153AQ9UHL3 310 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 A0A087X0T9 212 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 FAM228BP0C875 321 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 CDC37Q16543 378 aaPredicted RBP19.47■□□□□ 0.71
PTPN6-204ENST00000456013 UBE2SQ16763 222 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 SLF2Q8IX21 1173 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 ZC3H3Q8IXZ2 948 aaKnown RBP19.47■□□□□ 0.71
PTPN6-204ENST00000456013 PCDHA12Q9UN75 941 aa19.47■□□□□ 0.71
PTPN6-204ENST00000456013 RTCBQ9Y3I0 505 aaKnown RBP19.47■□□□□ 0.71
PTPN6-204ENST00000456013 GAKO14976 1311 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 ZSCAN5CA6NGD5 496 aaPredicted RBP19.46■□□□□ 0.71
PTPN6-204ENST00000456013 GCFC2P16383 781 aaKnown RBP19.46■□□□□ 0.71
PTPN6-204ENST00000456013 KLHL30Q0D2K2 578 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 RAPGEF1Q13905 1077 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 KIAA0753Q2KHM9 967 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 LRRC47Q8N1G4 583 aaKnown RBP19.46■□□□□ 0.71
PTPN6-204ENST00000456013 IFT81Q8WYA0 676 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 ARHGEF1Q92888 912 aaKnown RBP19.46■□□□□ 0.71
PTPN6-204ENST00000456013 GANQ9H2C0 597 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 KCTD10Q9H3F6 313 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 JMJD4Q9H9V9 463 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 GPCPD1Q9NPB8 672 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 IGKV6D-41A0A0C4DH26 115 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 ZNF233A6NK53 670 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 BTNL10A8MVZ5 291 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 CES2O00748 559 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 KRT14P02533 472 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 GPSM2P81274 684 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 EMC10Q5UCC4 262 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 NELFCDQ8IXH7 590 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 WHAMMQ8TF30 809 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 CASKIN2Q8WXE0 1202 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 KRT12Q99456 494 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.46■□□□□ 0.71
PTPN6-204ENST00000456013 TBC1D7Q9P0N9 293 aa19.46■□□□□ 0.71
PTPN6-204ENST00000456013 ESYT3A0FGR9 886 aa19.45■□□□□ 0.7
PTPN6-204ENST00000456013 MARCH6O60337 910 aa19.45■□□□□ 0.7
PTPN6-204ENST00000456013 ASIC2Q16515 512 aa19.45■□□□□ 0.7
PTPN6-204ENST00000456013 TTC19Q6DKK2 380 aaPredicted RBP19.45■□□□□ 0.7
PTPN6-204ENST00000456013 KDM7AQ6ZMT4 941 aa19.45■□□□□ 0.7
PTPN6-204ENST00000456013 C1orf131Q8NDD1 294 aaKnown RBP19.45■□□□□ 0.7
PTPN6-204ENST00000456013 PIK3R5Q8WYR1 880 aa19.45■□□□□ 0.7
PTPN6-204ENST00000456013 CUL5Q93034 780 aa19.45■□□□□ 0.7
PTPN6-204ENST00000456013 ADAMTS1Q9UHI8 967 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms