RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 ADAMTS7Q9UKP4 1686 aa10.58□□□□□ -0.72
LINC01940-201ENST00000455228 SART1O43290 800 aaKnown RBP10.58□□□□□ -0.72
LINC01940-201ENST00000455228 KDM1AO60341 852 aa10.58□□□□□ -0.72
LINC01940-201ENST00000455228 MYCLP1P12525 358 aaPredicted RBP10.58□□□□□ -0.72
LINC01940-201ENST00000455228 TRIM21P19474 475 aaKnown RBP10.58□□□□□ -0.72
LINC01940-201ENST00000455228 DAB2IPQ5VWQ8 1189 aa10.58□□□□□ -0.72
LINC01940-201ENST00000455228 OSBPL10Q9BXB5 764 aa10.58□□□□□ -0.72
LINC01940-201ENST00000455228 RPAP3Q9H6T3 665 aaPredicted RBP10.58□□□□□ -0.72
LINC01940-201ENST00000455228 ABHD10Q9NUJ1 306 aa10.58□□□□□ -0.72
LINC01940-201ENST00000455228 MKS1Q9NXB0 559 aa10.58□□□□□ -0.72
LINC01940-201ENST00000455228 AATFQ9NY61 560 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC01940-201ENST00000455228 GOLGA6L7A0A1B0GV03 622 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 RGL2O15211 777 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 KIAA0754O94854 1291 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 PPIDQ08752 370 aaKnown RBP10.57□□□□□ -0.72
LINC01940-201ENST00000455228 LSMEM2Q8N112 164 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 NOA1Q8NC60 698 aaKnown RBP10.57□□□□□ -0.72
LINC01940-201ENST00000455228 SPATA20Q8TB22 786 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 LRRC45Q96CN5 670 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 INIPQ9NRY2 104 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 TAB2Q9NYJ8 693 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 VPS54Q9P1Q0 977 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 C4AP0C0L4 1744 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 C4BP0C0L5 1744 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 CDC25AP30304 524 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 MRPS35P82673 323 aaKnown RBP10.57□□□□□ -0.72
LINC01940-201ENST00000455228 SPAG1Q07617 926 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 KRT31Q15323 416 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 ZNF174Q15697 407 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 CDKAL1Q5VV42 579 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 ZNF654Q8IZM8 581 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 CAGE1Q8TC20 777 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 HAPLN3Q96S86 360 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 CAPS2Q9BXY5 557 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 BLZF1Q9H2G9 400 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 SH3GLB1Q9Y371 365 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 DAAM1Q9Y4D1 1078 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 SLC4A4Q9Y6R1 1079 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 hCG_1642624A0A1W2PR95 340 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 SEMA3EO15041 775 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 PPP1R12BO60237 982 aaPredicted RBP10.57□□□□□ -0.72
LINC01940-201ENST00000455228 PDE8BO95263 885 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 KRT2P35908 639 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 GPSM2P81274 684 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 UBXN1Q04323 297 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 ARHGEF6Q15052 776 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 ALX1Q15699 326 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 GNPTABQ3T906 1256 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 TOM1L2Q6ZVM7 507 aa10.57□□□□□ -0.72
LINC01940-201ENST00000455228 APTXQ7Z2E3 356 aaKnown RBP10.57□□□□□ -0.72
LINC01940-201ENST00000455228 CLK4Q9HAZ1 481 aaKnown RBP10.57□□□□□ -0.72
LINC01940-201ENST00000455228 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 FAM25EA8MYX2 175 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 MINDY4BA8MYZ0 360 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 ENC1O14682 589 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 BAG3O95817 575 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 CSF1RP07333 972 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 BPIFB4P59827 614 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 ERVK-24P63145 666 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 TRIM14Q14142 442 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 IQCEQ6IPM2 695 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 CEP57Q86XR8 500 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 SLC43A3Q8NBI5 491 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 TTLL11Q8NHH1 800 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 TEKT4Q8WW24 435 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 FERMT2Q96AC1 680 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 CLIP3Q96DZ5 547 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 RNF41Q9H4P4 317 aaPredicted RBP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 NOD2Q9HC29 1040 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 EPB41L4AQ9HCS5 686 aaPredicted RBP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 C2CD2Q9Y426 696 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 PCDH11XQ9BZA7 1347 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 PCDH11YQ9BZA8 1340 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 A0A087X0B3 334 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 PPP1R3GB7ZBB8 358 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 BOLA2-SMG1P6H3BVE0 249 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 PRKAB2O43741 272 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 BMP15O95972 392 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 PBX1P40424 430 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 RCN1Q15293 331 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 ALS2CLQ60I27 953 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 BPHLQ86WA6 291 aaPredicted RBP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 TTC39CQ8N584 583 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 SPATA5Q8NB90 893 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 RUBCNQ92622 972 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 SMARCC1Q92922 1105 aaPredicted RBP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 CAPZA3Q96KX2 299 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 LRRC42Q9Y546 428 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 EPN1Q9Y6I3 576 aaPredicted RBP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 KIF13AQ9H1H9 1805 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 KIF1AQ12756 1690 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 ERVV-2B6SEH9 535 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 TROVE2P10155 538 aaKnown RBP eCLIP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 COPB1P53618 953 aaKnown RBP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 SH3BGRP55822 239 aaPredicted RBP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 ELF3P78545 371 aaPredicted RBP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 DPYDQ12882 1025 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 PAK1Q13153 545 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 ZNF268Q14587 947 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms