RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 CCDC83Q8IWF9 413 aa20.25■□□□□ 0.83
COPS7A-202ENST00000455113 GTF3C6Q969F1 213 aa20.25■□□□□ 0.83
COPS7A-202ENST00000455113 TRPV6Q9H1D0 765 aa20.25■□□□□ 0.83
COPS7A-202ENST00000455113 DEXIO95424 95 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 ITGB8P26012 769 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 ZNF76P36508 570 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 ST3GAL1Q11201 340 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 SCRN1Q12765 414 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 PKN1Q16512 942 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 REXO1Q8N1G1 1221 aaKnown RBP20.24■□□□□ 0.83
COPS7A-202ENST00000455113 C7orf31Q8N865 590 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 PPIGQ13427 754 aaKnown RBP eCLIP20.24■□□□□ 0.83
COPS7A-202ENST00000455113 JAKMIP3Q5VZ66 844 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 PGBD1Q96JS3 809 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 SH3GLB2Q9NR46 395 aa20.24■□□□□ 0.83
COPS7A-202ENST00000455113 TRMT13Q9NUP7 481 aaKnown RBP20.24■□□□□ 0.83
COPS7A-202ENST00000455113 HSP90AA1P07900 732 aaKnown RBP20.23■□□□□ 0.83
COPS7A-202ENST00000455113 ZNF286BP0CG31 522 aa20.23■□□□□ 0.83
COPS7A-202ENST00000455113 CLK2P49760 499 aaKnown RBP20.23■□□□□ 0.83
COPS7A-202ENST00000455113 NLRP5P59047 1200 aa20.23■□□□□ 0.83
COPS7A-202ENST00000455113 SPRYD3Q8NCJ5 442 aa20.23■□□□□ 0.83
COPS7A-202ENST00000455113 ALG1Q9BT22 464 aa20.23■□□□□ 0.83
COPS7A-202ENST00000455113 JADE2Q9NQC1 790 aa20.23■□□□□ 0.83
COPS7A-202ENST00000455113 UBIAD1Q9Y5Z9 338 aa20.23■□□□□ 0.83
COPS7A-202ENST00000455113 ITGB5P18084 799 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 PSEN2P49810 448 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 MFSD10Q14728 455 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 KIAA0753Q2KHM9 967 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 LRIT3Q3SXY7 679 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 MXRA8Q9BRK3 442 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 TMEM260Q9NX78 707 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 VPS54Q9P1Q0 977 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 F2P00734 622 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 XBP1P17861 261 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 SREBF1P36956 1147 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 SP4Q02446 784 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 SEMA3FQ13275 785 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 PTGISQ16647 500 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 KAT2BQ92831 832 aa20.22■□□□□ 0.83
COPS7A-202ENST00000455113 ZNF215Q9UL58 517 aaPredicted RBP20.22■□□□□ 0.83
COPS7A-202ENST00000455113 HOXD8P13378 290 aaPredicted RBP20.21■□□□□ 0.83
COPS7A-202ENST00000455113 CYP2C18P33260 490 aa20.21■□□□□ 0.83
COPS7A-202ENST00000455113 CEP55Q53EZ4 464 aa20.21■□□□□ 0.83
COPS7A-202ENST00000455113 SESTD1Q86VW0 696 aa20.21■□□□□ 0.83
COPS7A-202ENST00000455113 CCDC155Q8N6L0 562 aa20.21■□□□□ 0.83
COPS7A-202ENST00000455113 RANBP2P49792 3224 aaKnown RBP20.2■□□□□ 0.82
COPS7A-202ENST00000455113 H3BRB1 525 aa20.2■□□□□ 0.82
COPS7A-202ENST00000455113 ARHGAP4P98171 946 aa20.2■□□□□ 0.82
COPS7A-202ENST00000455113 BFSP2Q13515 415 aa20.2■□□□□ 0.82
COPS7A-202ENST00000455113 RETREG2Q8NC44 543 aa20.2■□□□□ 0.82
COPS7A-202ENST00000455113 INTS4Q96HW7 963 aaKnown RBP20.2■□□□□ 0.82
COPS7A-202ENST00000455113 GPR20Q99678 358 aa20.2■□□□□ 0.82
COPS7A-202ENST00000455113 SDF4Q9BRK5 362 aa20.2■□□□□ 0.82
COPS7A-202ENST00000455113 NOC4LQ9BVI4 516 aaKnown RBP20.2■□□□□ 0.82
COPS7A-202ENST00000455113 TUT1Q9H6E5 874 aaKnown RBP20.2■□□□□ 0.82
COPS7A-202ENST00000455113 PKD2L1Q9P0L9 805 aa20.2■□□□□ 0.82
COPS7A-202ENST00000455113 DOCK5Q9H7D0 1870 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 LGALS2P05162 132 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 CYP2C9P11712 490 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 CSF2RAP15509 400 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 SHHQ15465 462 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 FAM177A1Q8N128 213 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-202ENST00000455113 PPP1R13LQ8WUF5 828 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 RNPC3Q96LT9 517 aaKnown RBP20.19■□□□□ 0.82
COPS7A-202ENST00000455113 KCNH7Q9NS40 1196 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 HDAC6Q9UBN7 1215 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 GTF2IRD1Q9UHL9 959 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 ATP9AO75110 1047 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 KCNA2P16389 499 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 CCL23P55773 120 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 RPUSD2Q8IZ73 545 aaKnown RBP20.19■□□□□ 0.82
COPS7A-202ENST00000455113 C16orf70Q9BSU1 422 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 BCAS3Q9H6U6 928 aa20.19■□□□□ 0.82
COPS7A-202ENST00000455113 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-202ENST00000455113 HAS3O00219 553 aa20.18■□□□□ 0.82
COPS7A-202ENST00000455113 DTNBO60941 627 aa20.18■□□□□ 0.82
COPS7A-202ENST00000455113 CTDNEP1O95476 244 aa20.18■□□□□ 0.82
COPS7A-202ENST00000455113 C9orf50Q5SZB4 431 aa20.18■□□□□ 0.82
COPS7A-202ENST00000455113 UTP14CQ5TAP6 766 aaKnown RBP20.18■□□□□ 0.82
COPS7A-202ENST00000455113 PSRC1Q6PGN9 363 aaPredicted RBP20.18■□□□□ 0.82
COPS7A-202ENST00000455113 SEPT1Q8WYJ6 367 aa20.18■□□□□ 0.82
COPS7A-202ENST00000455113 WASF1Q92558 559 aa20.18■□□□□ 0.82
COPS7A-202ENST00000455113 JPH1Q9HDC5 661 aaPredicted RBP20.18■□□□□ 0.82
COPS7A-202ENST00000455113 TCF7P36402 384 aaPredicted RBP20.17■□□□□ 0.82
COPS7A-202ENST00000455113 GALNT17Q6IS24 598 aa20.17■□□□□ 0.82
COPS7A-202ENST00000455113 GDF6Q6KF10 455 aaPredicted RBP20.17■□□□□ 0.82
COPS7A-202ENST00000455113 CAGE1Q8TC20 777 aa20.17■□□□□ 0.82
COPS7A-202ENST00000455113 LLPHQ9BRT6 129 aaKnown RBP20.17■□□□□ 0.82
COPS7A-202ENST00000455113 MTIF3Q9H2K0 278 aaKnown RBP20.17■□□□□ 0.82
COPS7A-202ENST00000455113 STK36Q9NRP7 1315 aa20.16■□□□□ 0.82
COPS7A-202ENST00000455113 PITPNM1O00562 1244 aa20.16■□□□□ 0.82
COPS7A-202ENST00000455113 CYP3A4P08684 503 aa20.16■□□□□ 0.82
COPS7A-202ENST00000455113 SETQ01105 290 aaPredicted RBP20.16■□□□□ 0.82
COPS7A-202ENST00000455113 NIPA1Q7RTP0 329 aa20.16■□□□□ 0.82
COPS7A-202ENST00000455113 PLA2G4DQ86XP0 818 aa20.16■□□□□ 0.82
COPS7A-202ENST00000455113 NSUN7Q8NE18 718 aaKnown RBP20.16■□□□□ 0.82
COPS7A-202ENST00000455113 CYP2W1Q8TAV3 490 aa20.16■□□□□ 0.82
COPS7A-202ENST00000455113 IL23AQ9NPF7 189 aa20.16■□□□□ 0.82
COPS7A-202ENST00000455113 SLC9A2Q9UBY0 812 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms