RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ABHD14A-ACY1A0A1B0GW23 586 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 C17orf102A2RUQ5 167 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RSPH10B2B2RC85 870 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 B4DLN1 442 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 KLRF2D3W0D1 207 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 NOP56O00567 594 aaKnown RBP6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LINC01565O15544 149 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CYTH3O43739 400 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TBX10O75333 385 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 IGHDP01880 384 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 AMHP03971 560 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RSPH10BP0C881 870 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 HOXC8P31273 242 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CTNNB1P35222 781 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MRPL12P52815 198 aaKnown RBP6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ARHGAP4P98171 946 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 DLX2Q07687 328 aaPredicted RBP6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 HDAC1Q13547 482 aaPredicted RBP6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LAMC2Q13753 1193 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 UTP14CQ5TAP6 766 aaKnown RBP6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 DGKHQ86XP1 1220 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MCF2L2Q86YR7 1114 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 FAM178BQ8IXR5 827 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TTC14Q96N46 770 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 AMNQ9BXJ7 453 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RTEL1Q9NZ71 1219 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PCDHA1Q9Y5I3 950 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 USP34Q70CQ2 3546 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MYO15AQ9UKN7 3530 aa6.96□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LOXHD1Q8IVV2 1947 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 hCG_1642624A0A1W2PR95 340 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 H3BRB1 525 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ZBTB5O15062 677 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GRM6O15303 877 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 EIF3JO75822 258 aaKnown RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PCP11498 1178 aaKnown RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GSPT1P15170 499 aaKnown RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RXRAP19793 462 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CCND2P30279 289 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GATMP50440 423 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MRPS9P82933 396 aaKnown RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 HTRA4P83105 476 aaPredicted RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ZP2Q05996 745 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GPM6BQ13491 265 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SEC23AQ15436 765 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 IMMTQ16891 758 aaKnown RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LEXMQ3ZCV2 418 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TIGD5Q53EQ6 642 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PLEKHG4Q58EX7 1191 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 STOX1Q6ZVD7 989 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CYFIP1Q7L576 1253 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RPAINQ86UA6 219 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ALYREFQ86V81 257 aaKnown RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CHD1LQ86WJ1 897 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 BANK1Q8NDB2 785 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RGS22Q8NE09 1264 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SP7Q8TDD2 431 aaPredicted RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LINC01599Q8WXQ3 324 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MRPL38Q96DV4 380 aaKnown RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MTMR8Q96EF0 704 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 IWS1Q96ST2 819 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TUT1Q9H6E5 874 aaKnown RBP6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MLXIPQ9HAP2 919 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CLDND1Q9NY35 253 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 HCSTQ9UBK5 93 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 MUTYHQ9UIF7 546 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PNMA2Q9UL42 364 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 EMSYQ7Z589 1322 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 DMDP11532 3685 aa6.95□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PLXNA4Q9HCM2 1894 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GRXCR2A6NFK2 248 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PI4K2BG5E9Z4 385 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GCOM1H8Y6P7 765 aaPredicted RBP6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GPR37L1O60883 481 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PLEKHA8P1O95397 391 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 POLR2MP0CAP2 368 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PDE4AP27815 886 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 LTBRP36941 435 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 ANTXR2P58335 489 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 IGBP1P78318 339 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 RBM10P98175 930 aaKnown RBP6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GHRHRQ02643 423 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 NUCB1Q02818 461 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PTH1RQ03431 593 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TMEM62Q0P6H9 643 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GRM4Q14833 912 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 COL19A1Q14993 1142 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 UBE2SQ16763 222 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PAN2Q504Q3 1202 aaKnown RBP6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 USP17L6PQ6QN14 398 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 HFE2Q6ZVN8 426 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 VSIG10LQ86VR7 867 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SMC5Q8IY18 1101 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 TMEM192Q8IY95 271 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 CMTR1Q8N1G2 835 aaKnown RBP6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 EXOC6Q8TAG9 804 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 SEPT8Q92599 483 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 PHOX2BQ99453 314 aa6.94□□□□□ -1.3
HLA-DPA3-207ENST00000454398 GPR20Q99678 358 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms