RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 AGO4Q9HCK5 861 aaKnown RBP31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 KIF3AQ9Y496 699 aa31.83■■■□□ 2.69
SMARCC1-203ENST00000454240 MYL3P08590 195 aa31.82■■■□□ 2.68
SMARCC1-203ENST00000454240 HOXD8P13378 290 aaPredicted RBP31.82■■■□□ 2.68
SMARCC1-203ENST00000454240 INF2Q27J81 1249 aa31.82■■■□□ 2.68
SMARCC1-203ENST00000454240 PIK3AP1Q6ZUJ8 805 aa31.82■■■□□ 2.68
SMARCC1-203ENST00000454240 SMC3Q9UQE7 1217 aa31.82■■■□□ 2.68
SMARCC1-203ENST00000454240 SCN10AQ9Y5Y9 1956 aa31.81■■■□□ 2.68
SMARCC1-203ENST00000454240 CYP3A7-CYP3A51PA0A087WV96 503 aa31.81■■■□□ 2.68
SMARCC1-203ENST00000454240 CYP3A7P24462 503 aa31.81■■■□□ 2.68
SMARCC1-203ENST00000454240 SETQ01105 290 aaPredicted RBP31.81■■■□□ 2.68
SMARCC1-203ENST00000454240 SAFBQ15424 915 aaKnown RBP eCLIP31.81■■■□□ 2.68
SMARCC1-203ENST00000454240 DGKDQ16760 1214 aa31.81■■■□□ 2.68
SMARCC1-203ENST00000454240 LENG9Q96B70 501 aa31.81■■■□□ 2.68
SMARCC1-203ENST00000454240 NFASCO94856 1347 aa31.8■■■□□ 2.68
SMARCC1-203ENST00000454240 PPFIA4O75335 1185 aa31.8■■■□□ 2.68
SMARCC1-203ENST00000454240 PRR16Q569H4 304 aa31.8■■■□□ 2.68
SMARCC1-203ENST00000454240 MOXD1Q6UVY6 613 aa31.8■■■□□ 2.68
SMARCC1-203ENST00000454240 MTG1Q9BT17 334 aaPredicted RBP31.8■■■□□ 2.68
SMARCC1-203ENST00000454240 PKD2L1Q9P0L9 805 aa31.8■■■□□ 2.68
SMARCC1-203ENST00000454240 ITGB3BPQ13352 177 aaPredicted RBP31.79■■■□□ 2.68
SMARCC1-203ENST00000454240 NEK8Q86SG6 692 aa31.79■■■□□ 2.68
SMARCC1-203ENST00000454240 DPF3Q92784 378 aa31.79■■■□□ 2.68
SMARCC1-203ENST00000454240 VTI1AQ96AJ9 217 aa31.79■■■□□ 2.68
SMARCC1-203ENST00000454240 MBOAT7Q96N66 472 aa31.79■■■□□ 2.68
SMARCC1-203ENST00000454240 GPR20Q99678 358 aa31.79■■■□□ 2.68
SMARCC1-203ENST00000454240 FAM205CA6NFA0 338 aa31.78■■■□□ 2.68
SMARCC1-203ENST00000454240 Q4G0T1 1027 aa31.78■■■□□ 2.68
SMARCC1-203ENST00000454240 INTS4Q96HW7 963 aaKnown RBP31.78■■■□□ 2.68
SMARCC1-203ENST00000454240 FOXP1Q9H334 677 aaPredicted RBP31.78■■■□□ 2.68
SMARCC1-203ENST00000454240 TELO2Q9Y4R8 837 aa31.78■■■□□ 2.68
SMARCC1-203ENST00000454240 GRIN2DO15399 1336 aa31.77■■■□□ 2.68
SMARCC1-203ENST00000454240 A0A0U1RQG5 324 aaPredicted RBP31.77■■■□□ 2.68
SMARCC1-203ENST00000454240 TDP2O95551 362 aa31.77■■■□□ 2.68
SMARCC1-203ENST00000454240 CDK7P50613 346 aa31.77■■■□□ 2.68
SMARCC1-203ENST00000454240 RTP1P59025 263 aa31.77■■■□□ 2.68
SMARCC1-203ENST00000454240 SLC43A3Q8NBI5 491 aa31.77■■■□□ 2.68
SMARCC1-203ENST00000454240 IPO5O00410 1097 aaKnown RBP31.76■■■□□ 2.67
SMARCC1-203ENST00000454240 NOP56O00567 594 aaKnown RBP31.76■■■□□ 2.67
SMARCC1-203ENST00000454240 PSMC6P62333 389 aa31.76■■■□□ 2.67
SMARCC1-203ENST00000454240 LETM2Q2VYF4 491 aa31.76■■■□□ 2.67
SMARCC1-203ENST00000454240 PPP4R3AQ6IN85 833 aa31.76■■■□□ 2.67
SMARCC1-203ENST00000454240 KAT2BQ92831 832 aa31.76■■■□□ 2.67
SMARCC1-203ENST00000454240 SDF4Q9BRK5 362 aa31.76■■■□□ 2.67
SMARCC1-203ENST00000454240 ZNF577Q9BSK1 485 aa31.76■■■□□ 2.67
SMARCC1-203ENST00000454240 JPH1Q9HDC5 661 aaPredicted RBP31.76■■■□□ 2.67
SMARCC1-203ENST00000454240 PDE4DIPQ5VU43 2346 aa31.75■■■□□ 2.67
SMARCC1-203ENST00000454240 ARVCFO00192 962 aa31.75■■■□□ 2.67
SMARCC1-203ENST00000454240 DHX15O43143 795 aaKnown RBP31.75■■■□□ 2.67
SMARCC1-203ENST00000454240 EVI5O60447 810 aa31.75■■■□□ 2.67
SMARCC1-203ENST00000454240 ITGA7Q13683 1181 aa31.75■■■□□ 2.67
SMARCC1-203ENST00000454240 TRIM60Q495X7 471 aa31.75■■■□□ 2.67
SMARCC1-203ENST00000454240 SEZ6LQ9BYH1 1024 aa31.75■■■□□ 2.67
SMARCC1-203ENST00000454240 SLC9A2Q9UBY0 812 aa31.75■■■□□ 2.67
SMARCC1-203ENST00000454240 MSH4O15457 936 aa31.74■■■□□ 2.67
SMARCC1-203ENST00000454240 SP4Q02446 784 aa31.74■■■□□ 2.67
SMARCC1-203ENST00000454240 HSCBQ8IWL3 235 aa31.74■■■□□ 2.67
SMARCC1-203ENST00000454240 NAP1L4Q99733 375 aaKnown RBP31.74■■■□□ 2.67
SMARCC1-203ENST00000454240 C16orf70Q9BSU1 422 aa31.74■■■□□ 2.67
SMARCC1-203ENST00000454240 GSTTP1A0A1W2PQM5 241 aa31.73■■■□□ 2.67
SMARCC1-203ENST00000454240 GCFC2P16383 781 aaKnown RBP31.73■■■□□ 2.67
SMARCC1-203ENST00000454240 ANKRD33Q7Z3H0 272 aa31.73■■■□□ 2.67
SMARCC1-203ENST00000454240 SEPT1Q8WYJ6 367 aa31.73■■■□□ 2.67
SMARCC1-203ENST00000454240 TBC1D22BQ9NU19 505 aa31.73■■■□□ 2.67
SMARCC1-203ENST00000454240 DDX25Q9UHL0 483 aaKnown RBP31.73■■■□□ 2.67
SMARCC1-203ENST00000454240 ATP11BQ9Y2G3 1177 aa31.73■■■□□ 2.67
SMARCC1-203ENST00000454240 F2P00734 622 aa31.72■■■□□ 2.67
SMARCC1-203ENST00000454240 ZNF286BP0CG31 522 aa31.72■■■□□ 2.67
SMARCC1-203ENST00000454240 U2AF2P26368 475 aaKnown RBP eCLIP31.72■■■□□ 2.67
SMARCC1-203ENST00000454240 TOX2Q96NM4 488 aa31.72■■■□□ 2.67
SMARCC1-203ENST00000454240 UIMC1Q96RL1 719 aa31.72■■■□□ 2.67
SMARCC1-203ENST00000454240 HAS3O00219 553 aa31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 SLC37A4O43826 429 aa31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 CCNT1O60563 726 aaKnown RBP31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 LGALS2P05162 132 aa31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 TLE2Q04725 743 aa31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 NBPF20Q3BBV1 942 aa31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 LARP1BQ659C4 914 aaKnown RBP31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 NOSTRINQ8IVI9 506 aa31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 C7orf61Q8IZ16 206 aa31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 SLC5A5Q92911 643 aa31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 MROH7Q68CQ1 1323 aa31.71■■■□□ 2.67
SMARCC1-203ENST00000454240 KIF28PB7ZC32 967 aa31.7■■■□□ 2.67
SMARCC1-203ENST00000454240 TCF7P36402 384 aaPredicted RBP31.7■■■□□ 2.67
SMARCC1-203ENST00000454240 ETNPPLQ8TBG4 499 aa31.7■■■□□ 2.67
SMARCC1-203ENST00000454240 RIT2Q99578 217 aa31.7■■■□□ 2.67
SMARCC1-203ENST00000454240 KATNAL1Q9BW62 490 aa31.7■■■□□ 2.67
SMARCC1-203ENST00000454240 NR2E3Q9Y5X4 410 aa31.7■■■□□ 2.67
SMARCC1-203ENST00000454240 ATG7O95352 703 aa31.69■■■□□ 2.66
SMARCC1-203ENST00000454240 CCNE2O96020 404 aa31.69■■■□□ 2.66
SMARCC1-203ENST00000454240 PSEN2P49810 448 aa31.69■■■□□ 2.66
SMARCC1-203ENST00000454240 ACTR2P61160 394 aa31.69■■■□□ 2.66
SMARCC1-203ENST00000454240 GNL2Q13823 731 aaKnown RBP31.69■■■□□ 2.66
SMARCC1-203ENST00000454240 NFRKBQ6P4R8 1299 aa31.69■■■□□ 2.66
SMARCC1-203ENST00000454240 WDR81Q562E7 1941 aa31.69■■■□□ 2.66
SMARCC1-203ENST00000454240 H3BQV1 296 aa31.68■■■□□ 2.66
SMARCC1-203ENST00000454240 DDX39AO00148 427 aaKnown RBP31.68■■■□□ 2.66
SMARCC1-203ENST00000454240 PQBP1O60828 265 aaKnown RBP31.68■■■□□ 2.66
SMARCC1-203ENST00000454240 MFSD10Q14728 455 aa31.68■■■□□ 2.66
SMARCC1-203ENST00000454240 FAM126BQ8IXS8 530 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms