RNA–Protein interactions for RNA: ENST00000452172.1

XPC-203, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-203ENST00000452172 TRIM61Q5EBN2 209 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 PAOXQ6QHF9 649 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 BRAPQ7Z569 592 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 LRRTM3Q86VH5 581 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 LDHDQ86WU2 507 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 TMEM145Q8NBT3 493 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 KCTD13Q8WZ19 329 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 Q96M66 194 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 DSCC1Q9BVC3 393 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 IRF2BPLQ9H1B7 796 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 NKX2-4Q9H2Z4 354 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 KCNF1Q9H3M0 494 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 SLC52A2Q9HAB3 445 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 TRIM39Q9HCM9 518 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 INTS7Q9NVH2 962 aaKnown RBP4.51□□□□□ -1.69
XPC-203ENST00000452172 MAGEC2Q9UBF1 373 aaPredicted RBP4.51□□□□□ -1.69
XPC-203ENST00000452172 MINPP1Q9UNW1 487 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 MAPRE3Q9UPY8 281 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 ATP8A1Q9Y2Q0 1164 aa4.51□□□□□ -1.69
XPC-203ENST00000452172 GPR55Q9Y2T6 319 aaPredicted RBP4.51□□□□□ -1.69
XPC-203ENST00000452172 POLR3AO14802 1390 aaPredicted RBP4.51□□□□□ -1.69
XPC-203ENST00000452172 RGPD8O14715 1765 aaPredicted RBP4.5□□□□□ -1.69
XPC-203ENST00000452172 KDM6AO15550 1401 aaPredicted RBP4.5□□□□□ -1.69
XPC-203ENST00000452172 SCO2A0A1W2PP80 73 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 H0Y8X5 98 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 MEIS1O00470 390 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 SIGLEC6O43699 453 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 PRAMEF1O95521 474 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 CBX7O95931 251 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 FAM87AP0C7U9 286 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 HOXC12P31275 282 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 GABREP78334 506 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 NFKB2Q00653 900 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 AMPD2Q01433 879 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 CYP4F3Q08477 520 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 MAP4K2Q12851 820 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 PRSS53Q2L4Q9 553 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 DPY19L1Q2PZI1 675 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 SFRP5Q5T4F7 317 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 BEND4Q6ZU67 534 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 FAM214BQ7L5A3 538 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 FGD2Q7Z6J4 655 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 FERMT3Q86UX7 667 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 TXNRD3Q86VQ6 643 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 AMIGO3Q86WK7 504 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 DDX42Q86XP3 938 aaKnown RBP eCLIP4.5□□□□□ -1.69
XPC-203ENST00000452172 DTWD2Q8NBA8 298 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 GSTCDQ8NEC7 633 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 SYTL4Q96C24 671 aaPredicted RBP4.5□□□□□ -1.69
XPC-203ENST00000452172 COX4I2Q96KJ9 171 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 CAPNS2Q96L46 248 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 CCDC140Q96MF4 163 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 ZFP64Q9NPA5 681 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 PRDM5Q9NQX1 630 aaPredicted RBP4.5□□□□□ -1.69
XPC-203ENST00000452172 CHST7Q9NS84 486 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 HOMER2Q9NSB8 354 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 TYW1Q9NV66 732 aaKnown RBP4.5□□□□□ -1.69
XPC-203ENST00000452172 KCNH3Q9ULD8 1083 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 SF3B6Q9Y3B4 125 aaKnown RBP4.5□□□□□ -1.69
XPC-203ENST00000452172 ANKRD36BQ8N2N9 1353 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 COL18A1P39060 1754 aa4.5□□□□□ -1.69
XPC-203ENST00000452172 NHSQ6T4R5 1651 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.49□□□□□ -1.69
XPC-203ENST00000452172 PRR33A8MZF0 331 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 EFCAB14O75071 495 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 SCG5P05408 212 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 ITIH2P19823 946 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 ECI1P42126 302 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 NMIQ13287 307 aaPredicted RBP4.49□□□□□ -1.69
XPC-203ENST00000452172 SLC35F1Q5T1Q4 408 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 USP53Q70EK8 1073 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 KCNH5Q8NCM2 988 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 GIMAP7Q8NHV1 300 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 DDX1Q92499 740 aaKnown RBP4.49□□□□□ -1.69
XPC-203ENST00000452172 GATA6Q92908 595 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 PTPRN2Q92932 1015 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 C1orf159Q96HA4 380 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 SCLYQ96I15 445 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 CYP26B1Q9NR63 512 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 TNPO3Q9Y5L0 923 aaKnown RBP4.49□□□□□ -1.69
XPC-203ENST00000452172 USP47Q96K76 1375 aa4.49□□□□□ -1.69
XPC-203ENST00000452172 TNRC6CQ9HCJ0 1690 aaKnown RBP4.48□□□□□ -1.69
XPC-203ENST00000452172 PPIP5K1Q6PFW1 1433 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 TRPM1Q7Z4N2 1603 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 SHISA3A0PJX4 238 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 DHX15O43143 795 aaKnown RBP4.48□□□□□ -1.69
XPC-203ENST00000452172 HYAL3O43820 417 aaPredicted RBP4.48□□□□□ -1.69
XPC-203ENST00000452172 OPA1O60313 960 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 PARNO95453 639 aaKnown RBP4.48□□□□□ -1.69
XPC-203ENST00000452172 CPP00450 1065 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 S100BP04271 92 aaPredicted RBP4.48□□□□□ -1.69
XPC-203ENST00000452172 ASLP04424 464 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 ADMP35318 185 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 CTSKP43235 329 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 KIR3DL1P43629 444 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 TMF1P82094 1093 aa4.48□□□□□ -1.69
XPC-203ENST00000452172 POU4F1Q01851 419 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms