RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 NLRC5Q86WI3 1866 aa12.61□□□□□ -0.39
USP1-204ENST00000452143 H3BRB1 525 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 IFIT3O14879 490 aaKnown RBP12.6□□□□□ -0.39
USP1-204ENST00000452143 CYTH3O43739 400 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 ERVK-21P61565 698 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 SP2Q02086 613 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 MBTPS1Q14703 1052 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 WTAPQ15007 396 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 SLC35G1Q2M3R5 365 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 KRT40Q6A162 431 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 NCOA7Q8NI08 942 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 GDPD5Q8WTR4 605 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 WNT8BQ93098 351 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 INPP4AQ96PE3 977 aaPredicted RBP12.6□□□□□ -0.39
USP1-204ENST00000452143 TGS1Q96RS0 853 aaKnown RBP12.6□□□□□ -0.39
USP1-204ENST00000452143 C1QTNF1Q9BXJ1 281 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 TUT1Q9H6E5 874 aaKnown RBP12.6□□□□□ -0.39
USP1-204ENST00000452143 MLXIPQ9HAP2 919 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 KAT6AQ92794 2004 aa12.6□□□□□ -0.39
USP1-204ENST00000452143 C17orf102A2RUQ5 167 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 LINC01553A4QN01 128 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 RSPH10B2B2RC85 870 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 NOP56O00567 594 aaKnown RBP12.59□□□□□ -0.39
USP1-204ENST00000452143 AMHP03971 560 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 LGALS2P05162 132 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 RSPH10BP0C881 870 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 ICAM3P32942 547 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 ZNF200P98182 395 aaPredicted RBP12.59□□□□□ -0.39
USP1-204ENST00000452143 NEDD9Q14511 834 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 TCTN1Q2MV58 587 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 METTL7BQ6UX53 244 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 SPRED2Q7Z698 418 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 TMCO2Q7Z6W1 182 aaPredicted RBP12.59□□□□□ -0.39
USP1-204ENST00000452143 CATIPQ7Z7H3 387 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 FCHSD1Q86WN1 690 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 ATP6V0A1Q93050 837 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 NECAB3Q96P71 396 aaPredicted RBP12.59□□□□□ -0.39
USP1-204ENST00000452143 MAP3K14Q99558 947 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 USP26Q9BXU7 913 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 INSL6Q9Y581 213 aa12.59□□□□□ -0.39
USP1-204ENST00000452143 E7EWF7 191 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 FIBPO43427 364 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 SMIM10L2AP0DMW4 78 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 SMIM10L2BP0DMW5 78 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 CHMLP26374 656 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 PDE4AP27815 886 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 THPOP40225 353 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 HIC1Q14526 733 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 XRRA1Q6P2D8 792 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 SPZ1Q9BXG8 430 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 SUGCTQ9HAC7 445 aa12.58□□□□□ -0.4
USP1-204ENST00000452143 ZNF215Q9UL58 517 aaPredicted RBP12.58□□□□□ -0.4
USP1-204ENST00000452143 SPATA31C2B4DYI2 1134 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 SGSM2O43147 1006 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 SORBS3O60504 671 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 DDAH1O94760 285 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 GNAT1P11488 350 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 SMARCA1P28370 1054 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 KIF5BP33176 963 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 MRPS9P82933 396 aaKnown RBP12.57□□□□□ -0.4
USP1-204ENST00000452143 HTRA4P83105 476 aaPredicted RBP12.57□□□□□ -0.4
USP1-204ENST00000452143 PTH1RQ03431 593 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 PLEKHG4Q58EX7 1191 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 PCNX4Q63HM2 1172 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 MYOCDQ8IZQ8 938 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 DBF4BQ8NFT6 615 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
USP1-204ENST00000452143 GPKOWQ92917 476 aaPredicted RBP eCLIP12.57□□□□□ -0.4
USP1-204ENST00000452143 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
USP1-204ENST00000452143 SAMD11Q96NU1 681 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 SENP7Q9BQF6 1050 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 MTA3Q9BTC8 594 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 MTUS1Q9ULD2 1270 aa12.57□□□□□ -0.4
USP1-204ENST00000452143 PIK3CDO00329 1044 aa12.56□□□□□ -0.4
USP1-204ENST00000452143 TREHO43280 583 aa12.56□□□□□ -0.4
USP1-204ENST00000452143 MB21D2Q8IYB1 491 aaPredicted RBP12.56□□□□□ -0.4
USP1-204ENST00000452143 GIMAP8Q8ND71 665 aaPredicted RBP12.56□□□□□ -0.4
USP1-204ENST00000452143 SEPT8Q92599 483 aa12.56□□□□□ -0.4
USP1-204ENST00000452143 APBB2Q92870 758 aa12.56□□□□□ -0.4
USP1-204ENST00000452143 CUL5Q93034 780 aa12.56□□□□□ -0.4
USP1-204ENST00000452143 RRP36Q96EU6 259 aaKnown RBP12.56□□□□□ -0.4
USP1-204ENST00000452143 GPR20Q99678 358 aa12.56□□□□□ -0.4
USP1-204ENST00000452143 RNPEPQ9H4A4 650 aa12.56□□□□□ -0.4
USP1-204ENST00000452143 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
USP1-204ENST00000452143 SEC63Q9UGP8 760 aaKnown RBP12.56□□□□□ -0.4
USP1-204ENST00000452143 ANTXR2P58335 489 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 SEMA3FQ13275 785 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 FAM117BQ6P1L5 589 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
USP1-204ENST00000452143 CYFIP1Q7L576 1253 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 NLRX1Q86UT6 975 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 ZNF654Q8IZM8 581 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 FBXO22Q8NEZ5 403 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 SMARCC2Q8TAQ2 1214 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 IGDCC4Q8TDY8 1250 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 MAP4K1Q92918 833 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
USP1-204ENST00000452143 CDHR1Q96JP9 859 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 LZTS2Q9BRK4 669 aa12.55□□□□□ -0.4
USP1-204ENST00000452143 LY9Q9HBG7 655 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms