RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 TMEM132BQ14DG7 1078 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 RRAGBQ5VZM2 374 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP46-202ENST00000451218 PPP1R13BQ96KQ4 1090 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 NAT10Q9H0A0 1025 aaKnown RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 UNC45AQ9H3U1 944 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 HDAC9Q9UKV0 1011 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 RSPH10B2B2RC85 870 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 RSPH10BP0C881 870 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 UGCGQ16739 394 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 BMT2Q1RMZ1 405 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 TREML2Q5T2D2 321 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 C1orf186Q6ZWK4 172 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 SYTL5Q8TDW5 730 aaPredicted RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 LAMA2P24043 3122 aaKnown RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 SMTNL1A8MU46 457 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 SOCS7O14512 581 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 BCRP11274 1271 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 TERF1P54274 439 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 BACE1P56817 501 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 UBASH3AP57075 661 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 ATP2B2Q01814 1243 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 KCNA1Q09470 495 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 KCNMA1Q12791 1236 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 COASYQ13057 564 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 TMC6Q7Z403 805 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 SYT2Q8N9I0 419 aaPredicted RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 RNF25Q96BH1 459 aaPredicted RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 GOPCQ9HD26 462 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 GINM1Q9NU53 330 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 LRWD1Q9UFC0 647 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 NENFQ9UMX5 172 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 PVALEFA0A1B0GWK0 134 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 CCNE2O96020 404 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 ARHGAP25P42331 645 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 RBL2Q08999 1139 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 PAK1Q13153 545 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 ZYXQ15942 572 aaKnown RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 ZNF526Q8TF50 670 aaPredicted RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 LPAR1Q92633 364 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 POLR3CQ9BUI4 534 aaPredicted RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 WDR11Q9BZH6 1224 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 MRPL44Q9H9J2 332 aaKnown RBP7.39□□□□□ -1.23
USP46-202ENST00000451218 GGA3Q9NZ52 723 aa7.39□□□□□ -1.23
USP46-202ENST00000451218 ZNF263O14978 683 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 ATP9AO75110 1047 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 DDNO94850 711 aaPredicted RBP7.38□□□□□ -1.23
USP46-202ENST00000451218 MRPL12P52815 198 aaKnown RBP7.38□□□□□ -1.23
USP46-202ENST00000451218 MEA1Q16626 185 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 OGFOD1Q8N543 542 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 DNAJC7Q99615 494 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 SYT17Q9BSW7 474 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 THAP9Q9H5L6 903 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 SSUH2Q9Y2M2 353 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 ABCB11O95342 1321 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 SPDYE16A6NNV3 312 aaPredicted RBP7.38□□□□□ -1.23
USP46-202ENST00000451218 MFAP3LO75121 409 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 LMNB1P20700 586 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 PGM5Q15124 567 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 SMYD5Q6GMV2 418 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 ARHGEF10LQ9HCE6 1279 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 PDLIM7Q9NR12 457 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 RGL1Q9NZL6 768 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 LAMA3Q16787 3333 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 IRF6O14896 467 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 COPB1P53618 953 aaKnown RBP7.38□□□□□ -1.23
USP46-202ENST00000451218 VGLL4Q14135 290 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 SPECC1LQ69YQ0 1117 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 CCDC174Q6PII3 467 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 CATSPERGQ6ZRH7 1159 aa7.38□□□□□ -1.23
USP46-202ENST00000451218 AJAP1Q9UKB5 411 aaPredicted RBP7.38□□□□□ -1.23
USP46-202ENST00000451218 LGALS16A8MUM7 142 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 ADM5C9JUS6 153 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 TGFB1I1O43294 461 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 ADKP55263 362 aaKnown RBP7.37□□□□□ -1.23
USP46-202ENST00000451218 SP2Q02086 613 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 ASTE1Q2TB18 679 aaPredicted RBP7.37□□□□□ -1.23
USP46-202ENST00000451218 PRR16Q569H4 304 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 PCNX4Q63HM2 1172 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 FAM160B2Q86V87 743 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 SNX29Q8TEQ0 813 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 BAP1Q92560 729 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 ATG4CQ96DT6 458 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 REEP2Q9BRK0 252 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 AGO4Q9HCK5 861 aaKnown RBP7.37□□□□□ -1.23
USP46-202ENST00000451218 KCNJ18B7U540 433 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 SKILP12757 684 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 CCNE1P24864 410 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 KCNJ12Q14500 433 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 P2RX5Q93086 422 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 EIF2AK1Q9BQI3 630 aaKnown RBP7.37□□□□□ -1.23
USP46-202ENST00000451218 SLF1Q9BQI6 1058 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 PYM1Q9BRP8 204 aaKnown RBP7.37□□□□□ -1.23
USP46-202ENST00000451218 RPAP3Q9H6T3 665 aaPredicted RBP7.37□□□□□ -1.23
USP46-202ENST00000451218 PCDHA12Q9UN75 941 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 UBXN2AP68543 259 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 GPAT2Q6NUI2 795 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 LBX2Q6XYB7 198 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 NIPA1Q7RTP0 329 aa7.37□□□□□ -1.23
USP46-202ENST00000451218 GUF1Q8N442 669 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms