RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 ZBED2Q9BTP6 218 aa25.18■■□□□ 1.62
CPSF7-208ENST00000450000 PCDHA6Q9UN73 950 aa25.18■■□□□ 1.62
CPSF7-208ENST00000450000 PCDHA8Q9Y5H6 950 aa25.18■■□□□ 1.62
CPSF7-208ENST00000450000 THPOP40225 353 aa25.17■■□□□ 1.62
CPSF7-208ENST00000450000 ZNF200P98182 395 aaPredicted RBP25.17■■□□□ 1.62
CPSF7-208ENST00000450000 EXOSC10Q01780 885 aaKnown RBP25.17■■□□□ 1.62
CPSF7-208ENST00000450000 CNKSR3Q6P9H4 555 aa25.17■■□□□ 1.62
CPSF7-208ENST00000450000 RASEFQ8IZ41 740 aa25.17■■□□□ 1.62
CPSF7-208ENST00000450000 DHX38Q92620 1227 aaKnown RBP25.17■■□□□ 1.62
CPSF7-208ENST00000450000 VWCEQ96DN2 955 aa25.17■■□□□ 1.62
CPSF7-208ENST00000450000 GPR20Q99678 358 aa25.17■■□□□ 1.62
CPSF7-208ENST00000450000 CCDC196A0A1B0GTZ2 297 aa25.16■■□□□ 1.62
CPSF7-208ENST00000450000 SMIM10L2AP0DMW4 78 aa25.16■■□□□ 1.62
CPSF7-208ENST00000450000 SMIM10L2BP0DMW5 78 aa25.16■■□□□ 1.62
CPSF7-208ENST00000450000 MYOGP15173 224 aa25.16■■□□□ 1.62
CPSF7-208ENST00000450000 RBL2Q08999 1139 aa25.16■■□□□ 1.62
CPSF7-208ENST00000450000 ADCK5Q3MIX3 580 aa25.16■■□□□ 1.62
CPSF7-208ENST00000450000 CTAGE1Q96RT6 745 aa25.16■■□□□ 1.62
CPSF7-208ENST00000450000 BCAS3Q9H6U6 928 aa25.16■■□□□ 1.62
CPSF7-208ENST00000450000 V9GY48 417 aaPredicted RBP25.16■■□□□ 1.62
CPSF7-208ENST00000450000 EFCAB14O75071 495 aa25.15■■□□□ 1.62
CPSF7-208ENST00000450000 REC8O95072 547 aa25.15■■□□□ 1.62
CPSF7-208ENST00000450000 SEMA3FQ13275 785 aa25.15■■□□□ 1.62
CPSF7-208ENST00000450000 MTMR1Q13613 665 aa25.15■■□□□ 1.62
CPSF7-208ENST00000450000 IKBKEQ14164 716 aa25.15■■□□□ 1.62
CPSF7-208ENST00000450000 ZNF618Q5T7W0 954 aa25.15■■□□□ 1.62
CPSF7-208ENST00000450000 HERC6Q8IVU3 1022 aa25.15■■□□□ 1.62
CPSF7-208ENST00000450000 JAKMIP1Q96N16 626 aaKnown RBP25.15■■□□□ 1.62
CPSF7-208ENST00000450000 PKD2L1Q9P0L9 805 aa25.15■■□□□ 1.62
CPSF7-208ENST00000450000 BRPF3Q9ULD4 1205 aa25.15■■□□□ 1.62
CPSF7-208ENST00000450000 EMSYQ7Z589 1322 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 RSPH10B2B2RC85 870 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 hCG_1984214I3L0E3 225 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 TLL1O43897 1013 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 CA3P07451 260 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 RSPH10BP0C881 870 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 ADCY7P51828 1080 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 WWC2Q6AWC2 1192 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 PPP1R18Q6NYC8 613 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 BLOC1S2Q6QNY1 142 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 ZNF713Q8N859 430 aaPredicted RBP25.14■■□□□ 1.62
CPSF7-208ENST00000450000 GLT8D2Q9H1C3 349 aa25.14■■□□□ 1.62
CPSF7-208ENST00000450000 CNTNAP5Q8WYK1 1306 aa25.13■■□□□ 1.61
CPSF7-208ENST00000450000 COL6A3P12111 3177 aa25.13■■□□□ 1.61
CPSF7-208ENST00000450000 ABHD14A-ACY1A0A1B0GW23 586 aa25.13■■□□□ 1.61
CPSF7-208ENST00000450000 MAFGO15525 162 aa25.13■■□□□ 1.61
CPSF7-208ENST00000450000 FOSP01100 380 aaPredicted RBP25.13■■□□□ 1.61
CPSF7-208ENST00000450000 METAP2P50579 478 aaKnown RBP eCLIP25.13■■□□□ 1.61
CPSF7-208ENST00000450000 SERINC5Q86VE9 423 aa25.13■■□□□ 1.61
CPSF7-208ENST00000450000 RNPEPQ9H4A4 650 aa25.13■■□□□ 1.61
CPSF7-208ENST00000450000 NBNO60934 754 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 CXCL10P02778 98 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 PSMA5P28066 241 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 TCF7P36402 384 aaPredicted RBP25.12■■□□□ 1.61
CPSF7-208ENST00000450000 RCAN1P53805 252 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 WDR5P61964 334 aaKnown RBP25.12■■□□□ 1.61
CPSF7-208ENST00000450000 ARHGAP4P98171 946 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 CCDC85BQ15834 202 aaPredicted RBP25.12■■□□□ 1.61
CPSF7-208ENST00000450000 TEX2Q8IWB9 1127 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 SEPT1Q8WYJ6 367 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 GLG1Q92896 1179 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 TSPYL2Q9H2G4 693 aaPredicted RBP25.12■■□□□ 1.61
CPSF7-208ENST00000450000 RIC8AQ9NPQ8 531 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 JADE2Q9NQC1 790 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 SETD4Q9NVD3 440 aa25.12■■□□□ 1.61
CPSF7-208ENST00000450000 LAMA2P24043 3122 aaKnown RBP25.12■■□□□ 1.61
CPSF7-208ENST00000450000 SMCO2A6NFE2 343 aa25.11■■□□□ 1.61
CPSF7-208ENST00000450000 TREHO43280 583 aa25.11■■□□□ 1.61
CPSF7-208ENST00000450000 GTPBP6O43824 516 aaPredicted RBP25.11■■□□□ 1.61
CPSF7-208ENST00000450000 LGR5O75473 907 aa25.11■■□□□ 1.61
CPSF7-208ENST00000450000 ZNF76P36508 570 aa25.11■■□□□ 1.61
CPSF7-208ENST00000450000 AKAP17AQ02040 695 aaKnown RBP25.11■■□□□ 1.61
CPSF7-208ENST00000450000 Q6ZUG5 572 aa25.11■■□□□ 1.61
CPSF7-208ENST00000450000 TRIM50Q86XT4 487 aa25.11■■□□□ 1.61
CPSF7-208ENST00000450000 MICALL1Q8N3F8 863 aa25.11■■□□□ 1.61
CPSF7-208ENST00000450000 UBIAD1Q9Y5Z9 338 aa25.11■■□□□ 1.61
CPSF7-208ENST00000450000 MYH7BA7E2Y1 1941 aa25.1■■□□□ 1.61
CPSF7-208ENST00000450000 ITGB5P18084 799 aa25.1■■□□□ 1.61
CPSF7-208ENST00000450000 TRIM71Q2Q1W2 868 aaKnown RBP25.1■■□□□ 1.61
CPSF7-208ENST00000450000 WNT8BQ93098 351 aa25.1■■□□□ 1.61
CPSF7-208ENST00000450000 SDF4Q9BRK5 362 aa25.1■■□□□ 1.61
CPSF7-208ENST00000450000 CERS4Q9HA82 394 aa25.1■■□□□ 1.61
CPSF7-208ENST00000450000 ATP9AO75110 1047 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 CAND2O75155 1236 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 CTSHP09668 335 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 CPA1P15085 419 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 KCNA2P16389 499 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 HSPA4P34932 840 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 APOBRQ0VD83 1088 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 HIC1Q14526 733 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 ARNTL2Q8WYA1 636 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 SYMPKQ92797 1274 aaKnown RBP25.09■■□□□ 1.61
CPSF7-208ENST00000450000 TNPO1Q92973 898 aaKnown RBP25.09■■□□□ 1.61
CPSF7-208ENST00000450000 BRF1Q92994 677 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 AZI2Q9H6S1 392 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 BARHL2Q9NY43 387 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 ERAP1Q9NZ08 941 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 NRCAMQ92823 1304 aa25.09■■□□□ 1.61
CPSF7-208ENST00000450000 AP3B2Q13367 1082 aa25.08■■□□□ 1.61
CPSF7-208ENST00000450000 ADGRE1Q14246 886 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms