RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TUT1Q9H6E5 874 aaKnown RBP17.52■□□□□ 0.4
CHD3-205ENST00000449744 BCAS3Q9H6U6 928 aa17.52■□□□□ 0.4
CHD3-205ENST00000449744 C17orf102A2RUQ5 167 aa17.51■□□□□ 0.39
CHD3-205ENST00000449744 PARNO95453 639 aaKnown RBP17.51■□□□□ 0.39
CHD3-205ENST00000449744 SELPP16109 830 aa17.51■□□□□ 0.39
CHD3-205ENST00000449744 APOBRQ0VD83 1088 aa17.51■□□□□ 0.39
CHD3-205ENST00000449744 LRRC8DQ7L1W4 858 aa17.51■□□□□ 0.39
CHD3-205ENST00000449744 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHD3-205ENST00000449744 BRF1Q92994 677 aa17.51■□□□□ 0.39
CHD3-205ENST00000449744 VWCEQ96DN2 955 aa17.51■□□□□ 0.39
CHD3-205ENST00000449744 CTAGE1Q96RT6 745 aa17.51■□□□□ 0.39
CHD3-205ENST00000449744 GPR20Q99678 358 aa17.51■□□□□ 0.39
CHD3-205ENST00000449744 SCN5AQ14524 2016 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 TANC1Q9C0D5 1861 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 CKBP12277 381 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 ATP2A2P16615 1042 aaKnown RBP17.5■□□□□ 0.39
CHD3-205ENST00000449744 RPS6KB1P23443 525 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 CDC27P30260 824 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 ADCY7P51828 1080 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 ZNF200P98182 395 aaPredicted RBP17.5■□□□□ 0.39
CHD3-205ENST00000449744 RBL2Q08999 1139 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 FUT2Q10981 343 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 MTMR1Q13613 665 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 GRIN2CQ14957 1233 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 UTP14CQ5TAP6 766 aaKnown RBP17.5■□□□□ 0.39
CHD3-205ENST00000449744 TEX2Q8IWB9 1127 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 DHX38Q92620 1227 aaKnown RBP17.5■□□□□ 0.39
CHD3-205ENST00000449744 GLT8D2Q9H1C3 349 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 NKX2-4Q9H2Z4 354 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 SLC28A3Q9HAS3 691 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 RIC8AQ9NPQ8 531 aa17.5■□□□□ 0.39
CHD3-205ENST00000449744 ZNF215Q9UL58 517 aaPredicted RBP17.5■□□□□ 0.39
CHD3-205ENST00000449744 SMCO2A6NFE2 343 aa17.49■□□□□ 0.39
CHD3-205ENST00000449744 FOSP01100 380 aaPredicted RBP17.49■□□□□ 0.39
CHD3-205ENST00000449744 ITGB5P18084 799 aa17.49■□□□□ 0.39
CHD3-205ENST00000449744 ADD1P35611 737 aaKnown RBP17.49■□□□□ 0.39
CHD3-205ENST00000449744 MAFAQ8NHW3 353 aaPredicted RBP17.49■□□□□ 0.39
CHD3-205ENST00000449744 ATP6V0A1Q93050 837 aa17.49■□□□□ 0.39
CHD3-205ENST00000449744 SLC9A7Q96T83 725 aa17.49■□□□□ 0.39
CHD3-205ENST00000449744 FAM217BQ9NTX9 383 aaPredicted RBP17.49■□□□□ 0.39
CHD3-205ENST00000449744 BARHL2Q9NY43 387 aa17.49■□□□□ 0.39
CHD3-205ENST00000449744 UBIAD1Q9Y5Z9 338 aa17.49■□□□□ 0.39
CHD3-205ENST00000449744 STXBP3O00186 592 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 MAFGO15525 162 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 EPB41L2O43491 1005 aaKnown RBP17.48■□□□□ 0.39
CHD3-205ENST00000449744 BAIAP3O94812 1187 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 SMIM10L2AP0DMW4 78 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 SMIM10L2BP0DMW5 78 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 GNAT1P11488 350 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 RABGGTBP53611 331 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 TYW1BQ6NUM6 668 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 GAS2L1Q99501 681 aaPredicted RBP17.48■□□□□ 0.39
CHD3-205ENST00000449744 JADE2Q9NQC1 790 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 PPP4R2Q9NY27 417 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 PKD2L1Q9P0L9 805 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 PCDHA11Q9Y5I1 949 aa17.48■□□□□ 0.39
CHD3-205ENST00000449744 TRIP12Q14669 1992 aaPredicted RBP17.48■□□□□ 0.39
CHD3-205ENST00000449744 ATP9AO75110 1047 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 KCNA2P16389 499 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 KCNJ6P48051 423 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 AKAP17AQ02040 695 aaKnown RBP17.47■□□□□ 0.39
CHD3-205ENST00000449744 AP3B2Q13367 1082 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 HIC1Q14526 733 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 PFKFB3Q16875 520 aaPredicted RBP17.47■□□□□ 0.39
CHD3-205ENST00000449744 TRIM50Q86XT4 487 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 PHOSPHO2Q8TCD6 241 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 SEPT1Q8WYJ6 367 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 PGBD1Q96JS3 809 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 ANO3Q9BYT9 981 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 RNPEPQ9H4A4 650 aa17.47■□□□□ 0.39
CHD3-205ENST00000449744 YBX2Q9Y2T7 364 aaKnown RBP17.47■□□□□ 0.39
CHD3-205ENST00000449744 DOCK5Q9H7D0 1870 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 KIF28PB7ZC32 967 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 SCG2P13521 617 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 TCF7P36402 384 aaPredicted RBP17.46■□□□□ 0.39
CHD3-205ENST00000449744 THPOP40225 353 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 TRIM71Q2Q1W2 868 aaKnown RBP17.46■□□□□ 0.39
CHD3-205ENST00000449744 ZNF618Q5T7W0 954 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 PPP2R2DQ66LE6 453 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 CNKSR3Q6P9H4 555 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 SERINC5Q86VE9 423 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 FBXL16Q8N461 479 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 CCDC12Q8WUD4 166 aaPredicted RBP17.46■□□□□ 0.39
CHD3-205ENST00000449744 WNT8BQ93098 351 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 MXRA8Q9BRK3 442 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 PRDM12Q9H4Q4 367 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 SETD4Q9NVD3 440 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 TELO2Q9Y4R8 837 aa17.46■□□□□ 0.39
CHD3-205ENST00000449744 TREHO43280 583 aa17.45■□□□□ 0.38
CHD3-205ENST00000449744 NBNO60934 754 aa17.45■□□□□ 0.38
CHD3-205ENST00000449744 ZNF76P36508 570 aa17.45■□□□□ 0.38
CHD3-205ENST00000449744 GPNMBQ14956 572 aa17.45■□□□□ 0.38
CHD3-205ENST00000449744 ERICH6BQ5W0A0 696 aa17.45■□□□□ 0.38
CHD3-205ENST00000449744 RUFY3Q7L099 469 aa17.45■□□□□ 0.38
CHD3-205ENST00000449744 COL25A1Q9BXS0 654 aaPredicted RBP17.45■□□□□ 0.38
CHD3-205ENST00000449744 AGXT2Q9BYV1 514 aa17.45■□□□□ 0.38
CHD3-205ENST00000449744 TMEM260Q9NX78 707 aa17.45■□□□□ 0.38
CHD3-205ENST00000449744 EMSYQ7Z589 1322 aa17.45■□□□□ 0.38
CHD3-205ENST00000449744 NID2Q14112 1375 aa17.44■□□□□ 0.38
CHD3-205ENST00000449744 GBF1Q92538 1859 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms