RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
CCDC171-203ENST00000449575 CYP3A4P08684 503 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 AKR1A1P14550 325 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 TOB1P50616 345 aaPredicted RBP11.16□□□□□ -0.62
CCDC171-203ENST00000449575 SAFBQ15424 915 aaKnown RBP eCLIP11.16□□□□□ -0.62
CCDC171-203ENST00000449575 CEP55Q53EZ4 464 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 PRR16Q569H4 304 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 NOSTRINQ8IVI9 506 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 FOXP1Q9H334 677 aaPredicted RBP11.16□□□□□ -0.62
CCDC171-203ENST00000449575 BRMS1Q9HCU9 246 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 KCNH7Q9NS40 1196 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 DDX41Q9UJV9 622 aaKnown RBP11.16□□□□□ -0.62
CCDC171-203ENST00000449575 KIF3AQ9Y496 699 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 MRVI1Q9Y6F6 885 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 MEIS1O00470 390 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 STX6O43752 255 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
CCDC171-203ENST00000449575 UBA1P22314 1058 aaKnown RBP11.16□□□□□ -0.62
CCDC171-203ENST00000449575 ZNF76P36508 570 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 DNTTIP2Q5QJE6 756 aaKnown RBP11.16□□□□□ -0.62
CCDC171-203ENST00000449575 SCFD2Q8WU76 684 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 MPHOSPH6Q99547 160 aaKnown RBP11.16□□□□□ -0.62
CCDC171-203ENST00000449575 ARID3AQ99856 593 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 JADE2Q9NQC1 790 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 LMBRD1Q9NUN5 540 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 FAM184BQ9ULE4 1060 aa11.16□□□□□ -0.62
CCDC171-203ENST00000449575 B4DLN1 442 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 SPATA31C2B4DYI2 1134 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 CTAGE5O15320 804 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 PTMAP06454 111 aaKnown RBP11.15□□□□□ -0.62
CCDC171-203ENST00000449575 CIITAP33076 1130 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 BEX3Q00994 111 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 MTMR1Q13613 665 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 NEK8Q86SG6 692 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 TEX2Q8IWB9 1127 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 U2AF1L4Q8WU68 220 aaKnown RBP11.15□□□□□ -0.62
CCDC171-203ENST00000449575 EHMT1Q9H9B1 1298 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 NRBP1Q9UHY1 535 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 MYH9P35579 1960 aaKnown RBP11.15□□□□□ -0.62
CCDC171-203ENST00000449575 DYNC1LI2O43237 492 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-203ENST00000449575 CCNT1O60563 726 aaKnown RBP11.15□□□□□ -0.62
CCDC171-203ENST00000449575 EN2P19622 333 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-203ENST00000449575 USP11P51784 963 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 SOX10P56693 466 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 ITGB3BPQ13352 177 aaPredicted RBP11.15□□□□□ -0.62
CCDC171-203ENST00000449575 GNL2Q13823 731 aaKnown RBP11.15□□□□□ -0.62
CCDC171-203ENST00000449575 IQSEC1Q6DN90 963 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 PLA2G4DQ86XP0 818 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 CHAMP1Q96JM3 812 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 SYNRGQ9UMZ2 1314 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 ZDHHC9Q9Y397 364 aa11.15□□□□□ -0.62
CCDC171-203ENST00000449575 TRIP12Q14669 1992 aaPredicted RBP11.14□□□□□ -0.63
CCDC171-203ENST00000449575 CCDC85CA6NKD9 419 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 ADAMTS4O75173 837 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 GJB1P08034 283 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 KCNA2P16389 499 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 MNX1P50219 401 aaPredicted RBP11.14□□□□□ -0.63
CCDC171-203ENST00000449575 SP4Q02446 784 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 ARHGAP1Q07960 439 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 TTLL4Q14679 1199 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 XRRA1Q6P2D8 792 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 TLK2Q86UE8 772 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 POTEDQ86YR6 584 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 FTOQ9C0B1 505 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC171-203ENST00000449575 XPNPEP3Q9NQH7 507 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 PCDHB6Q9Y5E3 794 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 DDX39AO00148 427 aaKnown RBP11.14□□□□□ -0.63
CCDC171-203ENST00000449575 MSH4O15457 936 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 FIBPO43427 364 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 DUSP11O75319 330 aaKnown RBP11.14□□□□□ -0.63
CCDC171-203ENST00000449575 SGPL1O95470 568 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 GGPS1O95749 300 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 MBD3O95983 291 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 RARBP10826 455 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 PDCP20941 246 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 ICAM3P32942 547 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 RESTQ13127 1097 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 HSDL1Q3SXM5 330 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 FOXD4L6Q3SYB3 417 aaPredicted RBP11.14□□□□□ -0.63
CCDC171-203ENST00000449575 MCTP2Q6DN12 878 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 FOXD4L3Q6VB84 417 aaPredicted RBP11.14□□□□□ -0.63
CCDC171-203ENST00000449575 CYFIP1Q7L576 1253 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 DIS3LQ8TF46 1054 aaKnown RBP11.14□□□□□ -0.63
CCDC171-203ENST00000449575 PPP1R13LQ8WUF5 828 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 GPRASP2Q96D09 838 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
CCDC171-203ENST00000449575 AGO4Q9HCK5 861 aaKnown RBP11.14□□□□□ -0.63
CCDC171-203ENST00000449575 CYP3A7-CYP3A51PA0A087WV96 503 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 STAM2O75886 525 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 C6orf222P0C671 652 aaPredicted RBP11.13□□□□□ -0.63
CCDC171-203ENST00000449575 CYP3A7P24462 503 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 MCM7P33993 719 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 GJA8P48165 433 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 ZNF174Q15697 407 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 MYSM1Q5VVJ2 828 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 MBOAT7Q96N66 472 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 CRISPLD2Q9H0B8 497 aa11.13□□□□□ -0.63
CCDC171-203ENST00000449575 DDX25Q9UHL0 483 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms