RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 PNMA2Q9UL42 364 aa14.85□□□□□ -0.03
AC004540.1-204ENST00000449537 STX8Q9UNK0 236 aa14.85□□□□□ -0.03
AC004540.1-204ENST00000449537 MTMR7Q9Y216 660 aa14.85□□□□□ -0.03
AC004540.1-204ENST00000449537 DMXL1Q9Y485 3027 aa14.85□□□□□ -0.03
AC004540.1-204ENST00000449537 DMDP11532 3685 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 CAND2O75155 1236 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 PPFIA4O75335 1185 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 BRD1O95696 1058 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 SP100P23497 879 aaPredicted RBP14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 SLC16A2P36021 539 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 CCDC96Q2M329 555 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 TTBK2Q6IQ55 1244 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 PPTC7Q8NI37 304 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 MICAL1Q8TDZ2 1067 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 ATP8B4Q8TF62 1192 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 POF1BQ8WVV4 589 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 EMID1Q96A84 441 aaPredicted RBP14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 ZNF689Q96CS4 500 aaPredicted RBP14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 BCL11AQ9H165 835 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 DDX41Q9UJV9 622 aaKnown RBP14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 NR2E1Q9Y466 385 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 CHD8Q9HCK8 2581 aa14.84□□□□□ -0.03
AC004540.1-204ENST00000449537 C17orf102A2RUQ5 167 aa14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 PER2O15055 1255 aa14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 CTSHP09668 335 aa14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 TDO2P48775 406 aa14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 ANGPT1Q15389 498 aa14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 SYDE2Q5VT97 1194 aa14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 KLHL23Q8NBE8 558 aa14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 HAUS7Q99871 368 aa14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 RC3H2Q9HBD1 1191 aaKnown RBP14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 PLIN4Q96Q06 1357 aa14.83□□□□□ -0.04
AC004540.1-204ENST00000449537 FSD2A1L4K1 749 aa14.82□□□□□ -0.04
AC004540.1-204ENST00000449537 APPP05067 770 aa14.82□□□□□ -0.04
AC004540.1-204ENST00000449537 ATP5JP18859 108 aa14.82□□□□□ -0.04
AC004540.1-204ENST00000449537 RBM10P98175 930 aaKnown RBP14.82□□□□□ -0.04
AC004540.1-204ENST00000449537 STXBP2Q15833 593 aa14.82□□□□□ -0.04
AC004540.1-204ENST00000449537 BTNL9Q6UXG8 535 aa14.82□□□□□ -0.04
AC004540.1-204ENST00000449537 HINFPQ9BQA5 517 aa14.82□□□□□ -0.04
AC004540.1-204ENST00000449537 S1PR5Q9H228 398 aa14.82□□□□□ -0.04
AC004540.1-204ENST00000449537 TSHZ2Q9NRE2 1034 aa14.82□□□□□ -0.04
AC004540.1-204ENST00000449537 CEP250Q9BV73 2442 aa14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 ENPP3O14638 875 aa14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 TREHO43280 583 aa14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 DGKIO75912 1065 aa14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 SLC3A2P08195 630 aaKnown RBP14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 RASGRP2Q7LDG7 609 aa14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 CCDC105Q8IYK2 499 aa14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 FLCNQ8NFG4 579 aa14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 NSUN6Q8TEA1 469 aaKnown RBP14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 DCAF4Q8WV16 495 aa14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 CDCA3Q99618 268 aaPredicted RBP14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 MRPL42Q9Y6G3 142 aaKnown RBP14.81□□□□□ -0.04
AC004540.1-204ENST00000449537 PPFIA3O75145 1194 aa14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 SRGAP2BP0DMP2 458 aa14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 HOXD8P13378 290 aaPredicted RBP14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 RSPO4Q2I0M5 234 aaPredicted RBP14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 DTWD2Q8NBA8 298 aa14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 VN1R2Q8NFZ6 395 aa14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 IWS1Q96ST2 819 aa14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 MRVI1Q9Y6F6 885 aa14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 DNAH14Q0VDD8 3507 aa14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 MYH7BA7E2Y1 1941 aa14.8□□□□□ -0.04
AC004540.1-204ENST00000449537 PI15O43692 258 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 TECP42680 631 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 DUSP6Q16828 381 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 FAM26DQ5JW98 314 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 ANKRD54Q6NXT1 300 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 CEP85Q6P2H3 762 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 TMEM184AQ6ZMB5 413 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 CYP2W1Q8TAV3 490 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 KIF1BPQ96EK5 621 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 TAAR1Q96RJ0 339 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 C16orf70Q9BSU1 422 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 APOL5Q9BWW9 433 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 SMOC2Q9H3U7 446 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 RNPEPQ9H4A4 650 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 GPCPD1Q9NPB8 672 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 IL17RBQ9NRM6 502 aa14.79□□□□□ -0.04
AC004540.1-204ENST00000449537 SPTBN2O15020 2390 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 CHD6Q8TD26 2715 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 H3BRB1 525 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 EIF3JO75822 258 aaKnown RBP14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 SMIM10L2AP0DMW4 78 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 SMIM10L2BP0DMW5 78 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 GNAT1P11488 350 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 GNAT2P19087 354 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 AOC1P19801 751 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 HOXC8P31273 242 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 COL9A2Q14055 689 aaPredicted RBP14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 SYCE2Q6PIF2 218 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 CMTR2Q8IYT2 770 aaKnown RBP14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 RUBCNQ92622 972 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 SPATA33Q96N06 139 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 RTP3Q9BQQ7 232 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 TUT1Q9H6E5 874 aaKnown RBP14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 EPB41L4AQ9HCS5 686 aaPredicted RBP14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 ATRXP46100 2492 aa14.78□□□□□ -0.04
AC004540.1-204ENST00000449537 TTC3P53804 2025 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms