RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 ATP5JP18859 108 aa8.47□□□□□ -1.05
HDLBP-222ENST00000449504 PUM1Q14671 1186 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDLBP-222ENST00000449504 ZKSCAN2Q63HK3 967 aa8.47□□□□□ -1.05
HDLBP-222ENST00000449504 ASTLQ6HA08 431 aaPredicted RBP8.47□□□□□ -1.05
HDLBP-222ENST00000449504 SERINC5Q86VE9 423 aa8.47□□□□□ -1.05
HDLBP-222ENST00000449504 SPPL3Q8TCT6 385 aa8.47□□□□□ -1.05
HDLBP-222ENST00000449504 KIF1BPQ96EK5 621 aa8.47□□□□□ -1.05
HDLBP-222ENST00000449504 PLVAPQ9BX97 442 aa8.47□□□□□ -1.05
HDLBP-222ENST00000449504 SMOC2Q9H3U7 446 aa8.47□□□□□ -1.05
HDLBP-222ENST00000449504 EPB41L4AQ9HCS5 686 aaPredicted RBP8.47□□□□□ -1.05
HDLBP-222ENST00000449504 DDX41Q9UJV9 622 aaKnown RBP8.47□□□□□ -1.05
HDLBP-222ENST00000449504 ADGRA3Q8IWK6 1321 aa8.47□□□□□ -1.05
HDLBP-222ENST00000449504 MYH4Q9Y623 1939 aa8.46□□□□□ -1.05
HDLBP-222ENST00000449504 TSPY2A6NKD2 308 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 TREHO43280 583 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 BRD1O95696 1058 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 ITGB1P05556 798 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 SLC3A2P08195 630 aaKnown RBP8.46□□□□□ -1.06
HDLBP-222ENST00000449504 ATF7P17544 494 aaPredicted RBP8.46□□□□□ -1.06
HDLBP-222ENST00000449504 LAMC2Q13753 1193 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 STXBP2Q15833 593 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 USH1GQ495M9 461 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 FTSJ3Q8IY81 847 aaKnown RBP8.46□□□□□ -1.06
HDLBP-222ENST00000449504 IFNL3Q8IZI9 196 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 KLHL23Q8NBE8 558 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 FLCNQ8NFG4 579 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 POF1BQ8WVV4 589 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 TBC1D5Q92609 795 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 APBB2Q92870 758 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 CLP1Q92989 425 aaKnown RBP8.46□□□□□ -1.06
HDLBP-222ENST00000449504 OSBP2Q969R2 916 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 TAAR1Q96RJ0 339 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 MRVI1Q9Y6F6 885 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 MRPL42Q9Y6G3 142 aaKnown RBP8.46□□□□□ -1.06
HDLBP-222ENST00000449504 LCTP09848 1927 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 SPTBN4Q9H254 2564 aa8.46□□□□□ -1.06
HDLBP-222ENST00000449504 GPAA1O43292 621 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 IBSPP21815 317 aaPredicted RBP8.45□□□□□ -1.06
HDLBP-222ENST00000449504 MTMR3Q13615 1198 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 PAN2Q504Q3 1202 aaKnown RBP8.45□□□□□ -1.06
HDLBP-222ENST00000449504 PPP4R3BQ5MIZ7 849 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 UBALD2Q8IYN6 164 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 PPTC7Q8NI37 304 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 DCAF4Q8WV16 495 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 SUSD6Q92537 303 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 P2RX5Q93086 422 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 NEK1Q96PY6 1258 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 RNPEPQ9H4A4 650 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 IL17RBQ9NRM6 502 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 SORCS3Q9UPU3 1222 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 MICAL3Q7RTP6 2002 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 PLIN4Q96Q06 1357 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 C5orf42Q9H799 3197 aa8.45□□□□□ -1.06
HDLBP-222ENST00000449504 TRIOO75962 3097 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 MYO7AQ13402 2215 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 PATL2C9JE40 543 aaKnown RBP8.44□□□□□ -1.06
HDLBP-222ENST00000449504 ENPP3O14638 875 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 RANBP6O60518 1105 aaKnown RBP8.44□□□□□ -1.06
HDLBP-222ENST00000449504 PPFIA4O75335 1185 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 LMNAP02545 664 aaKnown RBP8.44□□□□□ -1.06
HDLBP-222ENST00000449504 SMIM10L2AP0DMW4 78 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 SMIM10L2BP0DMW5 78 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 GHRP10912 638 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 EIF2AK2P19525 551 aaKnown RBP8.44□□□□□ -1.06
HDLBP-222ENST00000449504 TECP42680 631 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 PPARAQ07869 468 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 BTNL9Q6UXG8 535 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 VN1R2Q8NFZ6 395 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 NSUN6Q8TEA1 469 aaKnown RBP8.44□□□□□ -1.06
HDLBP-222ENST00000449504 APPBP2Q92624 585 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 EMID1Q96A84 441 aaPredicted RBP8.44□□□□□ -1.06
HDLBP-222ENST00000449504 SPATA33Q96N06 139 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 NACAP1Q9BZK3 213 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 SETD4Q9NVD3 440 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 NLRC5Q86WI3 1866 aa8.44□□□□□ -1.06
HDLBP-222ENST00000449504 H3BRB1 525 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 M0R2C6 588 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 PI15O43692 258 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 DGKIO75912 1065 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 GGPS1O95749 300 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 ASGR2P07307 311 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 ARP10275 920 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 MYCLP12524 364 aaPredicted RBP8.43□□□□□ -1.06
HDLBP-222ENST00000449504 GNAT2P19087 354 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 CLCN5P51795 746 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 CTDSPL2Q05D32 466 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 ANGPT1Q15389 498 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 ST3GAL2Q16842 350 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 HSDL1Q3SXM5 330 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 NAALADL2Q58DX5 795 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 ARHGEF16Q5VV41 709 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 MYSM1Q5VVJ2 828 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 LLGL2Q6P1M3 1020 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 SYTL5Q8TDW5 730 aaPredicted RBP8.43□□□□□ -1.06
HDLBP-222ENST00000449504 ZNF689Q96CS4 500 aaPredicted RBP8.43□□□□□ -1.06
HDLBP-222ENST00000449504 RMDN3Q96TC7 470 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 C16orf70Q9BSU1 422 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 NAPBQ9H115 298 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 TUT1Q9H6E5 874 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms