RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 MAPK4P31152 587 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 PEX3P56589 373 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 UBE3CQ15386 1083 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 LARP4BQ92615 738 aaKnown RBP13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 EXT2Q93063 718 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 TMEM206Q9H813 350 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 PRPSAP2O60256 369 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 CIAO1O76071 339 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 PHKA2P46019 1235 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 GUCY2FP51841 1108 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 PTH1RQ03431 593 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 VEPH1Q14D04 833 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 ANO4Q32M45 955 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 ANKRD20A3Q5VUR7 823 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 FAM186BQ8IYM0 893 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 CEP120Q8N960 986 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 BANK1Q8NDB2 785 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 TUBB4AP04350 444 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 NSUN2Q08J23 767 aaKnown RBP eCLIP13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 NAA35Q5VZE5 725 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 LRRC43Q8N309 656 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 SUGT1Q9Y2Z0 365 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 CARMIL3Q8ND23 1372 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 CYP2B6P20813 491 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 SNX1Q13596 522 aa13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
AC006001.3-201ENST00000449307 MYO1FO00160 1098 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 UHMK1Q8TAS1 419 aaKnown RBP13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 ZNF274Q96GC6 653 aaPredicted RBP13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 PRIMPOLQ96LW4 560 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 TESK2Q96S53 571 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 UBE2TQ9NPD8 197 aaPredicted RBP13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 HUS1O60921 280 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 HUNKP57058 714 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 DNAJC24Q6P3W2 148 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 EXOC4Q96A65 974 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 DPH5Q9H2P9 285 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 PFKFB1P16118 471 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 ABCD1P33897 745 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 LONP1P36776 959 aaKnown RBP13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 CYP27A1Q02318 531 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 CACNB2Q08289 660 aaPredicted RBP13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 ME3Q16798 604 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 CNOT7Q9UIV1 285 aaKnown RBP13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 NEO1Q92859 1461 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 ARHGAP42A6NI28 874 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 CPP00450 1065 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 KRT1P04264 644 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 MYO5CQ9NQX4 1742 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 ATP6V1E1P36543 226 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 PPARGP37231 505 aaPredicted RBP13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 ARHGAP4P98171 946 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 SURF1Q15526 300 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 IFT43Q96FT9 208 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 TOPORSQ9NS56 1045 aaPredicted RBP13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 MCF2LO15068 1137 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 CTSHP09668 335 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 ZNF568Q3ZCX4 644 aa13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 SRPK1Q96SB4 655 aaKnown RBP13.8□□□□□ -0.2
AC006001.3-201ENST00000449307 ARHGAP6O43182 974 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 ARL4DP49703 201 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 NOP14P78316 857 aaKnown RBP13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 LLGL1Q15334 1064 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 ZNF302Q9NR11 478 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 MAP3K20Q9NYL2 800 aaKnown RBP13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 SFI1A8K8P3 1242 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 SREBF2Q12772 1141 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 FGD4Q96M96 766 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 ZNF827Q17R98 1081 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 PNMA6FA0A0J9YX94 578 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 STX2P32856 288 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 HLFQ16534 295 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 GLYCTKQ8IVS8 523 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 BEST2Q8NFU1 509 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 USP44Q9H0E7 712 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 RNF146Q9NTX7 359 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 METP08581 1390 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 MYL1P05976 194 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 PAK2Q13177 524 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 PI16Q6UXB8 463 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 FRA10AC1Q70Z53 315 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 CACNA2D3Q8IZS8 1091 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 CFAP36Q96G28 342 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
AC006001.3-201ENST00000449307 HVCN1Q96D96 273 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 RPAP3Q9H6T3 665 aaPredicted RBP13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 ZWILCHQ9H900 591 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 CBX8Q9HC52 389 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 TLR7Q9NYK1 1049 aaKnown RBP13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 CFAP43Q8NDM7 1665 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 C6orf222P0C671 652 aaPredicted RBP13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 ZNF394Q53GI3 561 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 COL15A1P39059 1388 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 POC1B-GALNT4F8VUJ3 575 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 GPC4O75487 556 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 SH3KBP1Q96B97 665 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 PARVGQ9HBI0 331 aa13.78□□□□□ -0.2
AC006001.3-201ENST00000449307 MYOM2P54296 1465 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms