RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 PURAQ00577 322 aaKnown RBP15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 CHRDL2Q6WN34 429 aa15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 PIK3AP1Q6ZUJ8 805 aa15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 C7orf61Q8IZ16 206 aa15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 CYP2W1Q8TAV3 490 aa15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 SMC3Q9UQE7 1217 aa15.94■□□□□ 0.14
GTF3C3-206ENST00000448539 FAM86B1E9PN63 330 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 ATP9AO75110 1047 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 PPFIA4O75335 1185 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 FAM86B2P0C5J1 330 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 ARP10275 920 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 KCNA2P16389 499 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 CIITAP33076 1130 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 CHMP4BP1P59074 171 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 GUCY1B3Q02153 619 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 SP4Q02446 784 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 ITGA7Q13683 1181 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 GNL2Q13823 731 aaKnown RBP15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 INF2Q27J81 1249 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 HSDL1Q3SXM5 330 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 TRIM60Q495X7 471 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 PRR16Q569H4 304 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 C1orf53Q5VUE5 145 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 DIS3L2Q8IYB7 885 aaKnown RBP15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 OXER1Q8TDS5 423 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 CRYGNQ8WXF5 182 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 SEZ6LQ9BYH1 1024 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 MROH7Q68CQ1 1323 aa15.93■□□□□ 0.14
GTF3C3-206ENST00000448539 ARVCFO00192 962 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 PQBP1O60828 265 aaKnown RBP15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 SNX17Q15036 470 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 LETM2Q2VYF4 491 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 NEK8Q86SG6 692 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 NAP1L4Q99733 375 aaKnown RBP15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 ZNF577Q9BSK1 485 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 KATNAL1Q9BW62 490 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 AGO4Q9HCK5 861 aaKnown RBP15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 JPH1Q9HDC5 661 aaPredicted RBP15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 PRKAG2Q9UGJ0 569 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 TCEAL9Q9UHQ7 104 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 ALPK3Q96L96 1907 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 NFASCO94856 1347 aa15.92■□□□□ 0.14
GTF3C3-206ENST00000448539 RANBP2P49792 3224 aaKnown RBP15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 IGLV3-22A0A075B6J6 115 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 DCDC2CA8MYV0 355 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 BTBD18B2RXH4 712 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 TLR3O15455 904 aaKnown RBP15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 GJB2P29033 226 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 PSMC6P62333 389 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 NR5A1Q13285 461 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 HSCBQ8IWL3 235 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 FBXO18Q8NFZ0 1043 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 GPR20Q99678 358 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 BCAS3Q9H6U6 928 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 SLC9A2Q9UBY0 812 aa15.91■□□□□ 0.14
GTF3C3-206ENST00000448539 K7ELQ4 463 aaPredicted RBP15.9■□□□□ 0.14
GTF3C3-206ENST00000448539 IPO5O00410 1097 aaKnown RBP15.9■□□□□ 0.14
GTF3C3-206ENST00000448539 ZNF286BP0CG31 522 aa15.9■□□□□ 0.14
GTF3C3-206ENST00000448539 TLE2Q04725 743 aa15.9■□□□□ 0.14
GTF3C3-206ENST00000448539 FAM47CQ5HY64 1035 aa15.9■□□□□ 0.14
GTF3C3-206ENST00000448539 UTP14CQ5TAP6 766 aaKnown RBP15.9■□□□□ 0.14
GTF3C3-206ENST00000448539 MOXD1Q6UVY6 613 aa15.9■□□□□ 0.14
GTF3C3-206ENST00000448539 SEPT1Q8WYJ6 367 aa15.9■□□□□ 0.14
GTF3C3-206ENST00000448539 TBC1D22BQ9NU19 505 aa15.9■□□□□ 0.14
GTF3C3-206ENST00000448539 CEP290O15078 2479 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 CYP3A7-CYP3A51PA0A087WV96 503 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 H3BQV1 296 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 DDX39AO00148 427 aaKnown RBP15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 TDP2O95551 362 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 HOXD8P13378 290 aaPredicted RBP15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 GCFC2P16383 781 aaKnown RBP15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 CYP3A7P24462 503 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 CDK7P50613 346 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 ITGB3BPQ13352 177 aaPredicted RBP15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 CUL4AQ13619 759 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 NBPF20Q3BBV1 942 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 Q4G0T1 1027 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 ANKRD33Q7Z3H0 272 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 SNX21Q969T3 373 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 TOX2Q96NM4 488 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 UIMC1Q96RL1 719 aa15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 FOXP1Q9H334 677 aaPredicted RBP15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 PRDM5Q9NQX1 630 aaPredicted RBP15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 DDX25Q9UHL0 483 aaKnown RBP15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 ZNF215Q9UL58 517 aaPredicted RBP15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
GTF3C3-206ENST00000448539 SZT2Q5T011 3432 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 MARCH6O60337 910 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 CCNT1O60563 726 aaKnown RBP15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 F2P00734 622 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 LGALS2P05162 132 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 CLTBP09497 229 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 TCF7P36402 384 aaPredicted RBP15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 PSEN2P49810 448 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 MFSD10Q14728 455 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 KIAA0753Q2KHM9 967 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 NFRKBQ6P4R8 1299 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 C7orf31Q8N865 590 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 SLC43A3Q8NBI5 491 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 TNFRSF25Q93038 417 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms