RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 WWC2Q6AWC2 1192 aa22.59■■□□□ 1.21
VCP-203ENST00000448530 PPP1R18Q6NYC8 613 aa22.59■■□□□ 1.21
VCP-203ENST00000448530 DHX38Q92620 1227 aaKnown RBP22.59■■□□□ 1.21
VCP-203ENST00000448530 GPRASP2Q96D09 838 aa22.59■■□□□ 1.21
VCP-203ENST00000448530 NKX2-4Q9H2Z4 354 aa22.59■■□□□ 1.21
VCP-203ENST00000448530 BCAS3Q9H6U6 928 aa22.59■■□□□ 1.21
VCP-203ENST00000448530 ZNF215Q9UL58 517 aaPredicted RBP22.59■■□□□ 1.21
VCP-203ENST00000448530 PCDHA6Q9UN73 950 aa22.59■■□□□ 1.21
VCP-203ENST00000448530 PCDHA8Q9Y5H6 950 aa22.59■■□□□ 1.21
VCP-203ENST00000448530 C17orf102A2RUQ5 167 aa22.58■■□□□ 1.21
VCP-203ENST00000448530 hCG_1984214I3L0E3 225 aa22.58■■□□□ 1.21
VCP-203ENST00000448530 CKBP12277 381 aa22.58■■□□□ 1.21
VCP-203ENST00000448530 RBL2Q08999 1139 aa22.58■■□□□ 1.21
VCP-203ENST00000448530 TEX2Q8IWB9 1127 aa22.58■■□□□ 1.21
VCP-203ENST00000448530 ZNF713Q8N859 430 aaPredicted RBP22.58■■□□□ 1.21
VCP-203ENST00000448530 KCNB2Q92953 911 aa22.58■■□□□ 1.21
VCP-203ENST00000448530 GAS2L1Q99501 681 aaPredicted RBP22.58■■□□□ 1.21
VCP-203ENST00000448530 GPR20Q99678 358 aa22.58■■□□□ 1.21
VCP-203ENST00000448530 PCDHA11Q9Y5I1 949 aa22.58■■□□□ 1.21
VCP-203ENST00000448530 SNX14Q9Y5W7 946 aa22.58■■□□□ 1.21
VCP-203ENST00000448530 BAIAP3O94812 1187 aa22.57■■□□□ 1.2
VCP-203ENST00000448530 CPA1P15085 419 aa22.57■■□□□ 1.2
VCP-203ENST00000448530 METAP2P50579 478 aaKnown RBP eCLIP22.57■■□□□ 1.2
VCP-203ENST00000448530 ADCY7P51828 1080 aa22.57■■□□□ 1.2
VCP-203ENST00000448530 RABGGTBP53611 331 aa22.57■■□□□ 1.2
VCP-203ENST00000448530 ZNF200P98182 395 aaPredicted RBP22.57■■□□□ 1.2
VCP-203ENST00000448530 Q6ZUG5 572 aa22.57■■□□□ 1.2
VCP-203ENST00000448530 SLC9A7Q96T83 725 aa22.57■■□□□ 1.2
VCP-203ENST00000448530 MYO9BQ13459 2157 aa22.57■■□□□ 1.2
VCP-203ENST00000448530 SMIM10L2AP0DMW4 78 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 SMIM10L2BP0DMW5 78 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 GNAT1P11488 350 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 PSMA5P28066 241 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 KCNJ6P48051 423 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 APOBRQ0VD83 1088 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 FUT2Q10981 343 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 MTMR1Q13613 665 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 UTP14CQ5TAP6 766 aaKnown RBP22.56■■□□□ 1.2
VCP-203ENST00000448530 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.56■■□□□ 1.2
VCP-203ENST00000448530 PHOSPHO2Q8TCD6 241 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 BRF1Q92994 677 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 ATP6V0A1Q93050 837 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 GLT8D2Q9H1C3 349 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 RIC8AQ9NPQ8 531 aa22.56■■□□□ 1.2
VCP-203ENST00000448530 YBX2Q9Y2T7 364 aaKnown RBP22.56■■□□□ 1.2
VCP-203ENST00000448530 TET1Q8NFU7 2136 aa22.55■■□□□ 1.2
VCP-203ENST00000448530 FOSP01100 380 aaPredicted RBP22.55■■□□□ 1.2
VCP-203ENST00000448530 ITGB5P18084 799 aa22.55■■□□□ 1.2
VCP-203ENST00000448530 PPP2R2DQ66LE6 453 aa22.55■■□□□ 1.2
VCP-203ENST00000448530 PRDM12Q9H4Q4 367 aa22.55■■□□□ 1.2
VCP-203ENST00000448530 BARHL2Q9NY43 387 aa22.55■■□□□ 1.2
VCP-203ENST00000448530 UBIAD1Q9Y5Z9 338 aa22.55■■□□□ 1.2
VCP-203ENST00000448530 SMCO2A6NFE2 343 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 KIF28PB7ZC32 967 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 STXBP3O00186 592 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 MAFGO15525 162 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 CDC27P30260 824 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 THPOP40225 353 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 ZNF618Q5T7W0 954 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 CNKSR3Q6P9H4 555 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 SERINC5Q86VE9 423 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 JADE2Q9NQC1 790 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 PKD2L1Q9P0L9 805 aa22.54■■□□□ 1.2
VCP-203ENST00000448530 KAT6AQ92794 2004 aa22.53■■□□□ 1.2
VCP-203ENST00000448530 DLL1O00548 723 aa22.53■■□□□ 1.2
VCP-203ENST00000448530 ATP9AO75110 1047 aa22.53■■□□□ 1.2
VCP-203ENST00000448530 KCNA2P16389 499 aa22.53■■□□□ 1.2
VCP-203ENST00000448530 RPS6KB1P23443 525 aa22.53■■□□□ 1.2
VCP-203ENST00000448530 ADD1P35611 737 aaKnown RBP22.53■■□□□ 1.2
VCP-203ENST00000448530 TRIM71Q2Q1W2 868 aaKnown RBP22.53■■□□□ 1.2
VCP-203ENST00000448530 TRIM50Q86XT4 487 aa22.53■■□□□ 1.2
VCP-203ENST00000448530 RNPEPQ9H4A4 650 aa22.53■■□□□ 1.2
VCP-203ENST00000448530 FAM217BQ9NTX9 383 aaPredicted RBP22.53■■□□□ 1.2
VCP-203ENST00000448530 EMSYQ7Z589 1322 aa22.53■■□□□ 1.2
VCP-203ENST00000448530 NBNO60934 754 aa22.52■■□□□ 1.2
VCP-203ENST00000448530 CXCL10P02778 98 aa22.52■■□□□ 1.2
VCP-203ENST00000448530 MYOGP15173 224 aa22.52■■□□□ 1.2
VCP-203ENST00000448530 TCF7P36402 384 aaPredicted RBP22.52■■□□□ 1.2
VCP-203ENST00000448530 HIC1Q14526 733 aa22.52■■□□□ 1.2
VCP-203ENST00000448530 TYW1BQ6NUM6 668 aa22.52■■□□□ 1.2
VCP-203ENST00000448530 HERC6Q8IVU3 1022 aa22.52■■□□□ 1.2
VCP-203ENST00000448530 SEPT1Q8WYJ6 367 aa22.52■■□□□ 1.2
VCP-203ENST00000448530 WNT8BQ93098 351 aa22.52■■□□□ 1.2
VCP-203ENST00000448530 ANO3Q9BYT9 981 aa22.52■■□□□ 1.2
VCP-203ENST00000448530 RSPH10B2B2RC85 870 aa22.51■■□□□ 1.19
VCP-203ENST00000448530 TREHO43280 583 aa22.51■■□□□ 1.19
VCP-203ENST00000448530 EPB41L2O43491 1005 aaKnown RBP22.51■■□□□ 1.19
VCP-203ENST00000448530 EFCAB14O75071 495 aa22.51■■□□□ 1.19
VCP-203ENST00000448530 RSPH10BP0C881 870 aa22.51■■□□□ 1.19
VCP-203ENST00000448530 SCG2P13521 617 aa22.51■■□□□ 1.19
VCP-203ENST00000448530 AKAP17AQ02040 695 aaKnown RBP22.51■■□□□ 1.19
VCP-203ENST00000448530 AP3B2Q13367 1082 aa22.51■■□□□ 1.19
VCP-203ENST00000448530 IKBKEQ14164 716 aa22.51■■□□□ 1.19
VCP-203ENST00000448530 PFKFB3Q16875 520 aaPredicted RBP22.51■■□□□ 1.19
VCP-203ENST00000448530 CCDC12Q8WUD4 166 aaPredicted RBP22.51■■□□□ 1.19
VCP-203ENST00000448530 MXRA8Q9BRK3 442 aa22.51■■□□□ 1.19
VCP-203ENST00000448530 SETD4Q9NVD3 440 aa22.51■■□□□ 1.19
VCP-203ENST00000448530 CDH23Q9H251 3354 aa22.5■■□□□ 1.19
VCP-203ENST00000448530 ABHD14A-ACY1A0A1B0GW23 586 aa22.5■■□□□ 1.19
VCP-203ENST00000448530 IGFBP4P22692 258 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms