RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RBM46Q8TBY0 533 aaKnown RBP9.6□□□□□ -0.87
NIPBL-202ENST00000448238 DEPDC1BQ8WUY9 529 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 PBXIP1Q96AQ6 731 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 MCRS1Q96EZ8 462 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 CENPXA8MT69 81 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 INPP5AQ14642 412 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 E2F4Q16254 413 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 RAB42Q8N4Z0 105 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 DIS3LQ8TF46 1054 aaKnown RBP9.6□□□□□ -0.87
NIPBL-202ENST00000448238 ZNF274Q96GC6 653 aaPredicted RBP9.6□□□□□ -0.87
NIPBL-202ENST00000448238 FAM193BQ96PV7 902 aaPredicted RBP9.6□□□□□ -0.87
NIPBL-202ENST00000448238 UBA2Q9UBT2 640 aaPredicted RBP9.6□□□□□ -0.87
NIPBL-202ENST00000448238 SPATA2Q9UM82 520 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 NFU1Q9UMS0 254 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 hCG_2014768A0A024R1R8 64 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 KIFC1Q9BW19 673 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 SLC24A3Q9HC58 644 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 KAT6AQ92794 2004 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 HSPA4LO95757 839 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 EXOC8Q8IYI6 725 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 METTL14Q9HCE5 456 aaKnown RBP9.6□□□□□ -0.87
NIPBL-202ENST00000448238 SCN3BQ9NY72 215 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 MAGEB6P1A0A0J9YX57 407 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 TTC23LQ6PF05 361 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 MAGOHBQ96A72 148 aaKnown RBP9.6□□□□□ -0.87
NIPBL-202ENST00000448238 VPS50Q96JG6 964 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 PHACTR3Q96KR7 559 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 FMO2Q99518 471 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 ADNPQ9H2P0 1102 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 GINS2Q9Y248 185 aa9.6□□□□□ -0.87
NIPBL-202ENST00000448238 SOS2Q07890 1332 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 DEXIO95424 95 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 TALDO1P37837 337 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 VCPP55072 806 aaKnown RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 NCKAP1LP55160 1127 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 TTC22Q5TAA0 569 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 TNIP2Q8NFZ5 429 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 EFHD2Q96C19 240 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 ANO3Q9BYT9 981 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 GUCY2DQ02846 1103 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 RSRC2Q7L4I2 434 aaKnown RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 JDP2Q8WYK2 163 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 C18orf25Q96B23 403 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 CCDC127Q96BQ5 260 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 PPP1R13BQ96KQ4 1090 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 TRIM54Q9BYV2 358 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 SPRTNQ9H040 489 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 KLHL20Q9Y2M5 609 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 RSPH10B2B2RC85 870 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 ZNF189O75820 626 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 RSPH10BP0C881 870 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 BCAP31P51572 246 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 ZNF75DP51815 510 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 SP4Q02446 784 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 S100A6P06703 90 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 WDR60Q8WVS4 1066 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 KLC1Q07866 573 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 CALCRLQ16602 461 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 ZBTB8OSQ8IWT0 167 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 BEGAINQ9BUH8 593 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 PITPNM3Q9BZ71 974 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 PDE11AQ9HCR9 933 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 SAP30BPQ9UHR5 308 aaKnown RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 STX7O15400 261 aaKnown RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 IFRD2Q12894 506 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-202ENST00000448238 ADALQ6DHV7 355 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 PDIK1LQ8N165 341 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 TBC1D19Q8N5T2 526 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 ULK4Q96C45 1275 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 OSBPL9Q96SU4 736 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 SLF1Q9BQI6 1058 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 BBS2Q9BXC9 721 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 AP4S1Q9Y587 144 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 ATP8B3O60423 1300 aa9.59□□□□□ -0.87
NIPBL-202ENST00000448238 MFN2O95140 757 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 CIITAP33076 1130 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 POSTNQ15063 836 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 KANK4Q5T7N3 995 aaPredicted RBP9.58□□□□□ -0.88
NIPBL-202ENST00000448238 SLC25A24Q6NUK1 477 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 DDHD1Q8NEL9 900 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 PRR23AA6NEV1 266 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 IDH3BO43837 385 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 GUCA1AP43080 201 aaPredicted RBP9.58□□□□□ -0.88
NIPBL-202ENST00000448238 PTK2Q05397 1052 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 TRADDQ15628 312 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 AASDHQ4L235 1098 aaPredicted RBP9.58□□□□□ -0.88
NIPBL-202ENST00000448238 KRT78Q8N1N4 520 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 TBC1D22AQ8WUA7 517 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 SPATA17Q96L03 361 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 PANX2Q96RD6 677 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 TRIM39Q9HCM9 518 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 ABCB1P08183 1280 aaPredicted RBP9.58□□□□□ -0.88
NIPBL-202ENST00000448238 CUL1Q13616 776 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
NIPBL-202ENST00000448238 MOSPD2Q8NHP6 518 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 EXD1Q8NHP7 514 aa9.58□□□□□ -0.88
NIPBL-202ENST00000448238 ADA2Q9NZK5 511 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms