RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 LRRC42Q9Y546 428 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 TACC3Q9Y6A5 838 aa21.04■□□□□ 0.96
HMGA1-205ENST00000447654 PJA2O43164 708 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 SRGNP10124 158 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 HNRNPH3P31942 346 aaKnown RBP21.03■□□□□ 0.96
HMGA1-205ENST00000447654 HSD17B3P37058 310 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 CCDC96Q2M329 555 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 GNPTABQ3T906 1256 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 HHATQ5VTY9 493 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 NFRKBQ6P4R8 1299 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 TRPM8Q7Z2W7 1104 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 MAGEB6Q8N7X4 407 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 CAPN6Q9Y6Q1 641 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 DUSP10Q9Y6W6 482 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 PARP1P09874 1014 aaKnown RBP21.03■□□□□ 0.96
HMGA1-205ENST00000447654 GUCY2FP51841 1108 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 MXRA7P84157 204 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 TAF11Q15544 211 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 SPDYCQ5MJ68 293 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 RRAGBQ5VZM2 374 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 CYB5R4Q7L1T6 521 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 IFT74Q96LB3 600 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 THAP9Q9H5L6 903 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 EPB41L4AQ9HCS5 686 aaPredicted RBP21.03■□□□□ 0.96
HMGA1-205ENST00000447654 RTL9Q8NET4 1388 aa21.03■□□□□ 0.96
HMGA1-205ENST00000447654 LAMB2P55268 1798 aa21.02■□□□□ 0.96
HMGA1-205ENST00000447654 TMOD1P28289 359 aa21.02■□□□□ 0.96
HMGA1-205ENST00000447654 IGHMBP2P38935 993 aaKnown RBP21.02■□□□□ 0.96
HMGA1-205ENST00000447654 ZNF658Q5TYW1 1059 aaPredicted RBP21.02■□□□□ 0.96
HMGA1-205ENST00000447654 TBC1D9BQ66K14 1250 aa21.02■□□□□ 0.96
HMGA1-205ENST00000447654 POTEAQ6S8J7 498 aa21.02■□□□□ 0.96
HMGA1-205ENST00000447654 NELFBQ8WX92 580 aa21.02■□□□□ 0.96
HMGA1-205ENST00000447654 FERMT2Q96AC1 680 aa21.02■□□□□ 0.96
HMGA1-205ENST00000447654 CCDC42Q96M95 316 aa21.02■□□□□ 0.96
HMGA1-205ENST00000447654 ZNF317Q96PQ6 595 aaPredicted RBP21.02■□□□□ 0.96
HMGA1-205ENST00000447654 LRWD1Q9UFC0 647 aa21.02■□□□□ 0.96
HMGA1-205ENST00000447654 PHF20L1A8MW92 1017 aa21.02■□□□□ 0.95
HMGA1-205ENST00000447654 AFMP43652 599 aa21.02■□□□□ 0.95
HMGA1-205ENST00000447654 TNNC1P63316 161 aa21.02■□□□□ 0.95
HMGA1-205ENST00000447654 IFIH1Q9BYX4 1025 aaKnown RBP21.02■□□□□ 0.95
HMGA1-205ENST00000447654 SRP68Q9UHB9 627 aaKnown RBP21.02■□□□□ 0.95
HMGA1-205ENST00000447654 ANAPC4Q9UJX5 808 aa21.02■□□□□ 0.95
HMGA1-205ENST00000447654 DPPA5A6NC42 116 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 LACTBP83111 547 aaPredicted RBP21.01■□□□□ 0.95
HMGA1-205ENST00000447654 ATP11AP98196 1134 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 C1QTNF12Q5T7M4 302 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 NUGGCQ68CJ6 796 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 CLEC4GQ6UXB4 293 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 MIPOL1Q8TD10 442 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 CCDC134Q9H6E4 229 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 SAMD15Q9P1V8 674 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 PCDHA13Q9Y5I0 950 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 DOCK2Q92608 1830 aa21.01■□□□□ 0.95
HMGA1-205ENST00000447654 PRKAB2O43741 272 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 FMNL1O95466 1100 aaPredicted RBP21■□□□□ 0.95
HMGA1-205ENST00000447654 CTNNA1P35221 906 aaKnown RBP21■□□□□ 0.95
HMGA1-205ENST00000447654 SSRP1Q08945 709 aaKnown RBP21■□□□□ 0.95
HMGA1-205ENST00000447654 APOA5Q6Q788 366 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 SMYD4Q8IYR2 804 aaPredicted RBP21■□□□□ 0.95
HMGA1-205ENST00000447654 CCDC24Q8N4L8 307 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 PLEKHG4BQ96PX9 1271 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 TRAPPC9Q96Q05 1148 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 TLR10Q9BXR5 811 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 TRIM4Q9C037 500 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 NSRP1Q9H0G5 558 aaKnown RBP21■□□□□ 0.95
HMGA1-205ENST00000447654 ARMT1Q9H993 441 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 CNOT8Q9UFF9 292 aaKnown RBP21■□□□□ 0.95
HMGA1-205ENST00000447654 NID2Q14112 1375 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 MBD4O95243 580 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 ALDH5A1P51649 535 aaPredicted RBP21■□□□□ 0.95
HMGA1-205ENST00000447654 EIF3BP55884 814 aaKnown RBP21■□□□□ 0.95
HMGA1-205ENST00000447654 SESTD1Q86VW0 696 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 DIS3L2Q8IYB7 885 aaKnown RBP21■□□□□ 0.95
HMGA1-205ENST00000447654 TMEM87BQ96K49 555 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 ZNF652Q9Y2D9 606 aa21■□□□□ 0.95
HMGA1-205ENST00000447654 ZSCAN9O15535 394 aaPredicted RBP20.99■□□□□ 0.95
HMGA1-205ENST00000447654 GTPBP6O43824 516 aaPredicted RBP20.99■□□□□ 0.95
HMGA1-205ENST00000447654 TLCD1Q96CP7 247 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 PCDHGA4Q9Y5G9 962 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 CASZ1Q86V15 1759 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 BTBD18B2RXH4 712 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 BHMG1C9JSJ3 638 aaPredicted RBP20.99■□□□□ 0.95
HMGA1-205ENST00000447654 CES2O00748 559 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 EVI5O60447 810 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 KIF4AO95239 1232 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 BAG3O95817 575 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 PYGBP11216 843 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 TRIM21P19474 475 aaKnown RBP20.99■□□□□ 0.95
HMGA1-205ENST00000447654 RANBP1P43487 201 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 GYG1P46976 350 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 NCALDP61601 193 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 CTDSPL2Q05D32 466 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 ADGRA1Q86SQ6 560 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 IRF2BP1Q8IU81 584 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 KRT23Q9C075 422 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 RAB17Q9H0T7 212 aa20.99■□□□□ 0.95
HMGA1-205ENST00000447654 B4E1Z4 1266 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 ZBTB43O43298 467 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 MOCS3O95396 460 aa20.98■□□□□ 0.95
HMGA1-205ENST00000447654 MRPS25P82663 173 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms