RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 BMP15O95972 392 aa20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 TNFAIP2Q03169 654 aa20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 IL17AQ16552 155 aa20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 LRCH2Q5VUJ6 765 aa20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 FAM20AQ96MK3 541 aa20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 FAM184BQ9ULE4 1060 aa20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 TELO2Q9Y4R8 837 aa20.33■□□□□ 0.85
TRAPPC4-203ENST00000447216 CENPFP49454 3210 aa20.33■□□□□ 0.84
TRAPPC4-203ENST00000447216 TBX3O15119 743 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 SPTLC2O15270 562 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 GAS7O60861 476 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 PSMD10O75832 226 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 MYCP01106 439 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 TGFB3P10600 412 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 SP4Q02446 784 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 KCNV1Q6PIU1 500 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 CYFIP1Q7L576 1253 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 SLFN12Q8IYM2 578 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 LEO1Q8WVC0 666 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 SPATA32Q96LK8 384 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 TEKT3Q9BXF9 490 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 RCOR1Q9UKL0 485 aa20.32■□□□□ 0.84
TRAPPC4-203ENST00000447216 LAD1O00515 517 aa20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 AKR1A1P14550 325 aa20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 GRIN1Q05586 938 aa20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 PKN2Q16513 984 aaKnown RBP20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 DUSP28Q4G0W2 176 aa20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 SENP7Q9BQF6 1050 aa20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 SDF4Q9BRK5 362 aa20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 UNC45AQ9H3U1 944 aa20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 TTC12Q9H892 705 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 VAV3Q9UKW4 847 aa20.31■□□□□ 0.84
TRAPPC4-203ENST00000447216 NFASCO94856 1347 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 VWA3AA6NCI4 1184 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 SEPT4O43236 478 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 CHMP2AO43633 222 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 PRPHP41219 470 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 TECP42680 631 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 ARHGAP1Q07960 439 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 NEDD9Q14511 834 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 MTFR1Q15390 333 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 CELF3Q5SZQ8 465 aaKnown RBP20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 DHX37Q8IY37 1157 aaKnown RBP20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 CLIC6Q96NY7 704 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 RIT2Q99578 217 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 UNC93B1Q9H1C4 597 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 TBC1D22BQ9NU19 505 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 FBXO2Q9UK22 296 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 PCDHA12Q9UN75 941 aa20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 GNEQ9Y223 722 aaKnown RBP20.3■□□□□ 0.84
TRAPPC4-203ENST00000447216 POTEFA5A3E0 1075 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 DYNC1LI2O43237 492 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 FARP2O94887 1054 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 CCNE2O96020 404 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 GH1P01241 217 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 IRX5P78411 483 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 TPRNQ4KMQ1 711 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 ARL6IP4Q66PJ3 421 aaKnown RBP20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 NCAPH2Q6IBW4 605 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 DTHD1Q6ZMT9 781 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 OR6J1Q8NGC5 347 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 KCNG4Q8TDN1 519 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 SCAND2PQ9GZW5 306 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 MLXIPQ9HAP2 919 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 JPH1Q9HDC5 661 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 HMX1Q9NP08 348 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 SLC9A2Q9UBY0 812 aa20.29■□□□□ 0.84
TRAPPC4-203ENST00000447216 POTEMA6NI47 508 aa20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 EML1O00423 815 aa20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 NKRFO15226 690 aaKnown RBP eCLIP20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 ME1P48163 572 aa20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 SPIRE1Q08AE8 756 aa20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 TMEM266Q2M3C6 531 aa20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 METTL7BQ6UX53 244 aa20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 TLK2Q86UE8 772 aa20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 GIMAP8Q8ND71 665 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 SRPRBQ9Y5M8 271 aaKnown RBP20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 MORC2Q9Y6X9 1032 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC4-203ENST00000447216 PP2D1A8MPX8 630 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 PPP6R2O75170 966 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 FXR2P51116 673 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 PPP2R5CQ13362 524 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 B3GNT9Q6UX72 402 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 KRI1Q8N9T8 703 aaKnown RBP20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 AFG1LQ8WV93 481 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 FERMT2Q96AC1 680 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 SPATA33Q96N06 139 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 MCOLN1Q9GZU1 580 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 DDX20Q9UHI6 824 aaKnown RBP20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 TCEAL9Q9UHQ7 104 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 PCDHA7Q9UN72 937 aa20.27■□□□□ 0.84
TRAPPC4-203ENST00000447216 DUSP11O75319 330 aaKnown RBP20.26■□□□□ 0.83
TRAPPC4-203ENST00000447216 RARBP10826 455 aa20.26■□□□□ 0.83
TRAPPC4-203ENST00000447216 CCL5P13501 91 aa20.26■□□□□ 0.83
TRAPPC4-203ENST00000447216 ACTR2P61160 394 aa20.26■□□□□ 0.83
TRAPPC4-203ENST00000447216 KRT76Q01546 638 aa20.26■□□□□ 0.83
TRAPPC4-203ENST00000447216 LAMC2Q13753 1193 aa20.26■□□□□ 0.83
TRAPPC4-203ENST00000447216 HSDL1Q3SXM5 330 aa20.26■□□□□ 0.83
TRAPPC4-203ENST00000447216 SPECC1Q5M775 1068 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms