RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SESTD1Q86VW0 696 aa9.27□□□□□ -0.92
PTPN3-204ENST00000446349 PROM2Q8N271 834 aa9.27□□□□□ -0.92
PTPN3-204ENST00000446349 PARK7Q99497 189 aaKnown RBP9.27□□□□□ -0.92
PTPN3-204ENST00000446349 ATP6V0A4Q9HBG4 840 aa9.27□□□□□ -0.92
PTPN3-204ENST00000446349 NRKQ7Z2Y5 1582 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 MROH7-TTC4A0A0A0MT08 1334 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 RAD51AP2Q09MP3 1159 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 PPP2R5DQ14738 602 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 MAPK6Q16659 721 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 STRIP1Q5VSL9 837 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 KCTD1Q719H9 257 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 C7orf31Q8N865 590 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 RDH13Q8NBN7 331 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 PALD1Q9ULE6 856 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 ZNRF3Q9ULT6 936 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 WDR46O15213 610 aaKnown RBP9.27□□□□□ -0.93
PTPN3-204ENST00000446349 KCNQ3O43525 872 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 PAMP19021 973 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 ZNF658Q5TYW1 1059 aaPredicted RBP9.27□□□□□ -0.93
PTPN3-204ENST00000446349 ANKRD20A3Q5VUR7 823 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 BAG5Q9UL15 447 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 ZBTB5O15062 677 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 TRAPPC3O43617 180 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 CAPN2P17655 700 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 NR2F2P24468 414 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 TYW1BQ6NUM6 668 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 AFAP1L1Q8TED9 768 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 WRNIP1Q96S55 665 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 FAM207AQ9NSI2 230 aaPredicted RBP9.27□□□□□ -0.93
PTPN3-204ENST00000446349 USP32Q8NFA0 1604 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 TTI1O43156 1089 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 SPATS2Q86XZ4 545 aaKnown RBP9.27□□□□□ -0.93
PTPN3-204ENST00000446349 LBHD1Q9BQE6 289 aaPredicted RBP9.27□□□□□ -0.93
PTPN3-204ENST00000446349 ACAD9Q9H845 621 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 CBX8Q9HC52 389 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 CD209Q9NNX6 404 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 ALX1Q15699 326 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 ZFYVE28Q9HCC9 887 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 STRIP2Q9ULQ0 834 aa9.27□□□□□ -0.93
PTPN3-204ENST00000446349 DIS3Q9Y2L1 958 aaKnown RBP9.27□□□□□ -0.93
PTPN3-204ENST00000446349 BRD1O95696 1058 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 MMP1P03956 469 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 TBXAS1P24557 533 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 SH3BGRP55822 239 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 CATSPER4Q7RTX7 472 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 RAET1EQ8TD07 263 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 TBCKQ8TEA7 893 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 HPCAL4Q9UM19 191 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 DENND3A2RUS2 1198 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 SH2B2O14492 632 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 MYL3P08590 195 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 ATF2P15336 505 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 GKAP1Q5VSY0 366 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 SUSD4Q5VX71 490 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 PPP1R12CQ9BZL4 782 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 FTOQ9C0B1 505 aaKnown RBP eCLIP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 VCX3AQ9NNX9 186 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 HACL1Q9UJ83 578 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 CLCN1P35523 988 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 MTMR1Q13613 665 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 PI4K2BQ8TCG2 481 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 SH3TC2Q8TF17 1288 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 KBTBD13C9JR72 458 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 ADORA1P30542 326 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 ARHGAP25P42331 645 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 MNAT1P51948 309 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 VEPH1Q14D04 833 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 TTBK2Q6IQ55 1244 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 CARNS1A5YM72 827 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 RHOXF2BP0C7M4 288 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 SNAPC2Q13487 334 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 ENOSF1Q7L5Y1 443 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 CCDC127Q96BQ5 260 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 RHOXF2Q9BQY4 288 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 MINPP1Q9UNW1 487 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 GTF2F1P35269 517 aaKnown RBP eCLIP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 TXNRD1Q16881 649 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 SPICE1Q8N0Z3 855 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 MCUR1Q96AQ8 359 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 GCOM2Q9BZD3 368 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 ARHGEF40Q8TER5 1519 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 SMIM23A6NLE4 172 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 ADD1P35611 737 aaKnown RBP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 POTEDQ86YR6 584 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 TEX2Q8IWB9 1127 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 PSPC1Q8WXF1 523 aaKnown RBP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 GPKOWQ92917 476 aaPredicted RBP eCLIP9.26□□□□□ -0.93
PTPN3-204ENST00000446349 P2RX5Q93086 422 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 RMDN3Q96TC7 470 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 KIF9Q9HAQ2 790 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 FER1L4A9Z1Z3 1794 aa9.26□□□□□ -0.93
PTPN3-204ENST00000446349 DCCP43146 1447 aa9.25□□□□□ -0.93
PTPN3-204ENST00000446349 KRIT1O00522 736 aa9.25□□□□□ -0.93
PTPN3-204ENST00000446349 DPYSL4O14531 572 aa9.25□□□□□ -0.93
PTPN3-204ENST00000446349 SART1O43290 800 aaKnown RBP9.25□□□□□ -0.93
PTPN3-204ENST00000446349 JAK2O60674 1132 aa9.25□□□□□ -0.93
PTPN3-204ENST00000446349 GSTA1P08263 222 aa9.25□□□□□ -0.93
PTPN3-204ENST00000446349 GSTA2P09210 222 aa9.25□□□□□ -0.93
PTPN3-204ENST00000446349 ADCY8P40145 1251 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms