RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 PIK3CDO00329 1044 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 MYOGP15173 224 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 UBA1P22314 1058 aaKnown RBP16.08■□□□□ 0.16
TREX1-202ENST00000444177 NAPAP54920 295 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 FUT2Q10981 343 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 GPNMBQ14956 572 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 UBE2SQ16763 222 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 FBXL16Q8N461 479 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 AFAP1L1Q8TED9 768 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 DHX38Q92620 1227 aaKnown RBP16.08■□□□□ 0.16
TREX1-202ENST00000444177 GAS2L1Q99501 681 aaPredicted RBP16.08■□□□□ 0.16
TREX1-202ENST00000444177 COL25A1Q9BXS0 654 aaPredicted RBP16.08■□□□□ 0.16
TREX1-202ENST00000444177 AGXT2Q9BYV1 514 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 MLXIPQ9HAP2 919 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 FAM217BQ9NTX9 383 aaPredicted RBP16.08■□□□□ 0.16
TREX1-202ENST00000444177 RTEL1Q9NZ71 1219 aa16.08■□□□□ 0.16
TREX1-202ENST00000444177 SPATA31C2B4DYI2 1134 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 MEIS2O14770 477 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 STAM2O75886 525 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 SELPP16109 830 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 ICAM3P32942 547 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 ADD1P35611 737 aaKnown RBP16.07■□□□□ 0.16
TREX1-202ENST00000444177 ZNF200P98182 395 aaPredicted RBP16.07■□□□□ 0.16
TREX1-202ENST00000444177 RBL2Q08999 1139 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 ADGRE1Q14246 886 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 GNPTABQ3T906 1256 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 PPP1R18Q6NYC8 613 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 INPP4AQ96PE3 977 aaPredicted RBP16.07■□□□□ 0.16
TREX1-202ENST00000444177 C16orf70Q9BSU1 422 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 TM6SF1Q9BZW5 370 aa16.07■□□□□ 0.16
TREX1-202ENST00000444177 V9GY48 417 aaPredicted RBP16.07■□□□□ 0.16
TREX1-202ENST00000444177 CHD7Q9P2D1 2997 aa16.06■□□□□ 0.16
TREX1-202ENST00000444177 SPDYE3A6NKU9 549 aa16.06■□□□□ 0.16
TREX1-202ENST00000444177 CKBP12277 381 aa16.06■□□□□ 0.16
TREX1-202ENST00000444177 PTK7Q13308 1070 aa16.06■□□□□ 0.16
TREX1-202ENST00000444177 TOB2Q14106 344 aaPredicted RBP16.06■□□□□ 0.16
TREX1-202ENST00000444177 LRRC8DQ7L1W4 858 aa16.06■□□□□ 0.16
TREX1-202ENST00000444177 USP38Q8NB14 1042 aa16.06■□□□□ 0.16
TREX1-202ENST00000444177 PHOSPHO2Q8TCD6 241 aa16.06■□□□□ 0.16
TREX1-202ENST00000444177 PDRG1Q9NUG6 133 aa16.06■□□□□ 0.16
TREX1-202ENST00000444177 VCANP13611 3396 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 hCG_1984214I3L0E3 225 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 STXBP3O00186 592 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 ADCY7P51828 1080 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
TREX1-202ENST00000444177 SEMA3FQ13275 785 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 NEDD9Q14511 834 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 HIC1Q14526 733 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 TRIM71Q2Q1W2 868 aaKnown RBP16.05■□□□□ 0.16
TREX1-202ENST00000444177 PCNX4Q63HM2 1172 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 PPP2R2DQ66LE6 453 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 TYW1BQ6NUM6 668 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 XRRA1Q6P2D8 792 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 ZNF713Q8N859 430 aaPredicted RBP16.05■□□□□ 0.16
TREX1-202ENST00000444177 SLC9A7Q96T83 725 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
TREX1-202ENST00000444177 BARHL2Q9NY43 387 aa16.05■□□□□ 0.16
TREX1-202ENST00000444177 H3BRB1 525 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 FIBPO43427 364 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 PPFIA3O75145 1194 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 BAIAP3O94812 1187 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 PARNO95453 639 aaKnown RBP16.04■□□□□ 0.16
TREX1-202ENST00000444177 IGFBP4P22692 258 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
TREX1-202ENST00000444177 AKAP17AQ02040 695 aaKnown RBP16.04■□□□□ 0.16
TREX1-202ENST00000444177 PFKFB3Q16875 520 aaPredicted RBP16.04■□□□□ 0.16
TREX1-202ENST00000444177 METTL7BQ6UX53 244 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 CYFIP1Q7L576 1253 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 HERC6Q8IVU3 1022 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 PPM1EQ8WY54 764 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 WNT8BQ93098 351 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 PHKBQ93100 1093 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 TUT1Q9H6E5 874 aaKnown RBP16.04■□□□□ 0.16
TREX1-202ENST00000444177 EHMT1Q9H9B1 1298 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 NCOA5Q9HCD5 579 aaKnown RBP16.04■□□□□ 0.16
TREX1-202ENST00000444177 PCDHA6Q9UN73 950 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 PCDHA8Q9Y5H6 950 aa16.04■□□□□ 0.16
TREX1-202ENST00000444177 NOP56O00567 594 aaKnown RBP16.03■□□□□ 0.16
TREX1-202ENST00000444177 NBNO60934 754 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 CXCL10P02778 98 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 LGALS2P05162 132 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 CA3P07451 260 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 SCG2P13521 617 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 EVCP57679 992 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 ANAPC15P60006 121 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 STK3Q13188 491 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 ZNF618Q5T7W0 954 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 TRAF7Q6Q0C0 670 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 PGBD1Q96JS3 809 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 GPR20Q99678 358 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 SENP7Q9BQF6 1050 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 SLC26A6Q9BXS9 759 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 RIC8AQ9NPQ8 531 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 GBF1Q92538 1859 aa16.03■□□□□ 0.16
TREX1-202ENST00000444177 NCOR1O75376 2440 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 C17orf102A2RUQ5 167 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 SMCO2A6NFE2 343 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 KIF28PB7ZC32 967 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 KCNJ6P48051 423 aa16.02■□□□□ 0.16
TREX1-202ENST00000444177 CNKSR3Q6P9H4 555 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms