RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 UBIAD1Q9Y5Z9 338 aa11.79□□□□□ -0.52
HLA-DQB1-206ENST00000443574 PPFIA4O75335 1185 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 RAG1P15918 1043 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 CHMP4BP1P59074 171 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 CYFIP1Q7L576 1253 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 NIPA1Q7RTP0 329 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 FAM126BQ8IXS8 530 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 BLIDQ8IZY5 108 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 NECAB1Q8N987 351 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 TBC1D32Q96NH3 1257 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 MXRA8Q9BRK3 442 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 LLPHQ9BRT6 129 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 ALG1Q9BT22 464 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 NOD1Q9Y239 953 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 KIF3AQ9Y496 699 aa11.78□□□□□ -0.52
HLA-DQB1-206ENST00000443574 CCDC194A0A1B0GVG4 234 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 A0A1W2PPC1 479 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 KIAA0355O15063 1070 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 LARGE1O95461 756 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 F2P00734 622 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 CYP3A4P08684 503 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 ZNF286BP0CG31 522 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 HOXD8P13378 290 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 ITGB5P18084 799 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 MCM2P49736 904 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 CDK7P50613 346 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 PSMC6P62333 389 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 HMGN5P82970 282 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 HSDL1Q3SXM5 330 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 KRT25Q7Z3Z0 450 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 CCDC155Q8N6L0 562 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 C7orf31Q8N865 590 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 SLC43A3Q8NBI5 491 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 NSUN7Q8NE18 718 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 JPH1Q9HDC5 661 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 KCNH7Q9NS40 1196 aa11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TRIP12Q14669 1992 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TRIOBPQ9H2D6 2365 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 SORBS3O60504 671 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 KCNA2P16389 499 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 MAGEA10P43363 369 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 PSEN2P49810 448 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 SP2Q02086 613 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 SP4Q02446 784 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 FAAP100Q0VG06 881 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 SEMA3FQ13275 785 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 MFSD10Q14728 455 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 CCDC83Q8IWF9 413 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 RASGRP4Q8TDF6 673 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 AIFM3Q96NN9 605 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 KIF2CQ99661 725 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 NAP1L4Q99733 375 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 PHF20Q9BVI0 1012 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 UBE2OQ9C0C9 1292 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 PKD2L1Q9P0L9 805 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 SLC9A2Q9UBY0 812 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TBX21Q9UL17 535 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 NFASCO94856 1347 aa11.76□□□□□ -0.53
HLA-DQB1-206ENST00000443574 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 H3BRB1 525 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 MEIS1O00470 390 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 B4GALT4O60513 344 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 CTDNEP1O95476 244 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 LGALS2P05162 132 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 BMP8BP34820 402 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 KRT2P35908 639 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 USP11P51784 963 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 MDM2Q00987 491 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 SAFBQ15424 915 aaKnown RBP eCLIP11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 SESTD1Q86VW0 696 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 FAM184AQ8NB25 1140 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TBCKQ8TEA7 893 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TNPO1Q92973 898 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 GPR20Q99678 358 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 GDF15Q99988 308 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 ZNF577Q9BSK1 485 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 BACH2Q9BYV9 841 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TUT1Q9H6E5 874 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 AZI2Q9H6S1 392 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TBC1D22BQ9NU19 505 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 EMSYQ7Z589 1322 aa11.75□□□□□ -0.53
HLA-DQB1-206ENST00000443574 FAM86B1E9PN63 330 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 IPO5O00410 1097 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TIMP1P01033 207 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 CD4P01730 458 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 FAM86B2P0C5J1 330 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 CIITAP33076 1130 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TCF7P36402 384 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 FPGSQ05932 587 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 BFSP2Q13515 415 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 PRR16Q569H4 304 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 MOXD1Q6UVY6 613 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 TMEM199Q8N511 208 aa11.74□□□□□ -0.53
HLA-DQB1-206ENST00000443574 CRYGNQ8WXF5 182 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms