RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 FBXO38Q6PIJ6 1188 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 CCDC89Q8N998 374 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 VPS37BQ9H9H4 285 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 KMT5AQ9NQR1 393 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 FBXO2Q9UK22 296 aaPredicted RBP24.45■■□□□ 1.5
CTDSPL-206ENST00000443503 HEXIM1O94992 359 aaKnown RBP24.45■■□□□ 1.5
CTDSPL-206ENST00000443503 CTDNEP1O95476 244 aa24.45■■□□□ 1.5
CTDSPL-206ENST00000443503 PCDHA6Q9UN73 950 aa24.45■■□□□ 1.5
CTDSPL-206ENST00000443503 PCDHA8Q9Y5H6 950 aa24.45■■□□□ 1.5
CTDSPL-206ENST00000443503 E9PMD0 336 aa24.45■■□□□ 1.5
CTDSPL-206ENST00000443503 ADCY8P40145 1251 aa24.45■■□□□ 1.5
CTDSPL-206ENST00000443503 AP3B2Q13367 1082 aa24.45■■□□□ 1.5
CTDSPL-206ENST00000443503 ZNF512BQ96KM6 892 aaPredicted RBP24.45■■□□□ 1.5
CTDSPL-206ENST00000443503 MYO1FO00160 1098 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 MFAP3P55082 362 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 MGARPQ8TDB4 240 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 P4HA1P13674 534 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 YARSP54577 528 aaKnown RBP24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 IQCB1Q15051 598 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 FAM160B2Q86V87 743 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 EPB41L5Q9HCM4 733 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 MKRN1Q9UHC7 482 aaKnown RBP24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 TNNC2P02585 160 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 KCTD16Q68DU8 428 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 FAM71BQ8TC56 605 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 ZNF341Q9BYN7 854 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 PCDHA13Q9Y5I0 950 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 ASNSP08243 561 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 AKR1B1P15121 316 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 USP14P54578 494 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 IGBP1P78318 339 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 ANKRD42Q8N9B4 389 aa24.44■■□□□ 1.5
CTDSPL-206ENST00000443503 TDP2O95551 362 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 ITPK1Q13572 414 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 MAGOHBQ96A72 148 aaKnown RBP24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 ABHD10Q9NUJ1 306 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 PLEKHG2Q9H7P9 1386 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 C2orf54Q08AI8 447 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 DCAF4Q8WV16 495 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 PLCB1Q9NQ66 1216 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 MXI1P50539 228 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 ARHGAP4P98171 946 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 HHATQ5VTY9 493 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 MMS19Q96T76 1030 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 RAB20Q9NX57 234 aa24.43■■□□□ 1.5
CTDSPL-206ENST00000443503 BCAS4Q8TDM0 211 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 DCPSQ96C86 337 aaKnown RBP24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 SERPING1P05155 500 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 PIK3CAP42336 1068 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 NAA30Q147X3 362 aaPredicted RBP24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 QRICH1Q2TAL8 776 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 USP49Q70CQ1 688 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 PROCA1Q8NCQ7 364 aaPredicted RBP24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 TMEM206Q9H813 350 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 FRMPD1Q5SYB0 1578 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 POTEB3A0JP26 581 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 POTECB2RU33 542 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 F5H6K3 240 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 NTSR2O95665 410 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 KLRC3Q07444 240 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 CIAPIN1Q6FI81 312 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 POTEBQ6S5H4 581 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 DPF2Q92785 391 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 ZNF653Q96CK0 615 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 CD163L1Q9NR16 1453 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 LACTBP83111 547 aaPredicted RBP24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 ALKBH5Q6P6C2 394 aaKnown RBP24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 SEPT14Q6ZU15 432 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 PREX1Q8TCU6 1659 aa24.42■■□□□ 1.5
CTDSPL-206ENST00000443503 PPP2R5DQ14738 602 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 FAM83BQ5T0W9 1011 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 ADPGKQ9BRR6 497 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 COL3A1P02461 1466 aaPredicted RBP24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 SCYL2Q6P3W7 929 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 UBE2TQ9NPD8 197 aaPredicted RBP24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 PVALEFA0A1B0GWK0 134 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 GOLGA8KD6RF30 607 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 ATP8B1O43520 1251 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 GTF2A1P52655 376 aaPredicted RBP24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 KCTD2Q14681 263 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 PPP2R5AQ15172 486 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 TAF12Q16514 161 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 CASC4Q6P4E1 433 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 VSIG1Q86XK7 387 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 SSX2IPQ9Y2D8 614 aa24.41■■□□□ 1.5
CTDSPL-206ENST00000443503 ECE2O60344 883 aa24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 PPFIA4O75335 1185 aa24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 TMOD1P28289 359 aa24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 BPIFB4P59827 614 aa24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 CFAP157Q5JU67 520 aa24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 CAPN12Q6ZSI9 719 aa24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 SFR1Q86XK3 245 aa24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 PABPN1LA6NDY0 278 aaKnown RBP24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 INO80B-WBP1J3KQ70 363 aa24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 PGRMC1O00264 195 aaKnown RBP24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 PPP4R3CPQ6ZMV5 832 aa24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 INO80BQ9C086 356 aaPredicted RBP24.4■■□□□ 1.5
CTDSPL-206ENST00000443503 SALL3Q9BXA9 1300 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms