RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ZSWIM3Q96MP5 696 aa7.04□□□□□ -1.28
VPS50-206ENST00000443443 CROTQ9UKG9 612 aa7.04□□□□□ -1.28
VPS50-206ENST00000443443 LRG1P02750 347 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 GRK2P25098 689 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 GRK3P35626 688 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 GPR85P60893 370 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 SSRP1Q08945 709 aaKnown RBP7.03□□□□□ -1.28
VPS50-206ENST00000443443 KIAA2012Q0VF49 1180 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 FAM124AQ86V42 546 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 SCUBE1Q8IWY4 988 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 ZNF669Q96BR6 464 aaPredicted RBP7.03□□□□□ -1.28
VPS50-206ENST00000443443 CLIC6Q96NY7 704 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 ZFYVE21Q9BQ24 234 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 HIRIP3Q9BW71 556 aaPredicted RBP7.03□□□□□ -1.28
VPS50-206ENST00000443443 CCDC113Q9H0I3 377 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 ASH2LQ9UBL3 628 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 DUSP10Q9Y6W6 482 aa7.03□□□□□ -1.28
VPS50-206ENST00000443443 SOD2P04179 222 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 CYP1A1P04798 512 aaPredicted RBP7.02□□□□□ -1.29
VPS50-206ENST00000443443 IL13P35225 146 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 ADAM9Q13443 819 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 RASGRF1Q13972 1273 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 ZFYVE27Q5T4F4 411 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 STYK1Q6J9G0 422 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 TMC5Q6UXY8 1006 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 OTOP3Q7RTS5 596 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 CLEC4DQ8WXI8 215 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 ALG1Q9BT22 464 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 LNPKQ9C0E8 428 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 L2HGDHQ9H9P8 463 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 SIRPGQ9P1W8 387 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 MSRB2Q9Y3D2 182 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 TRAF6Q9Y4K3 522 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 NUB1Q9Y5A7 615 aa7.02□□□□□ -1.29
VPS50-206ENST00000443443 FAM47E-STBD1D6RA91 191 aa7.01□□□□□ -1.29
VPS50-206ENST00000443443 SKOR2Q2VWA4 1001 aaPredicted RBP7.01□□□□□ -1.29
VPS50-206ENST00000443443 FAM209AQ5JX71 171 aa7.01□□□□□ -1.29
VPS50-206ENST00000443443 NBPF6Q5VWK0 638 aa7.01□□□□□ -1.29
VPS50-206ENST00000443443 PRRT2Q7Z6L0 340 aaPredicted RBP7.01□□□□□ -1.29
VPS50-206ENST00000443443 TXNDC5Q8NBS9 432 aaKnown RBP7.01□□□□□ -1.29
VPS50-206ENST00000443443 NBPF4Q96M43 638 aa7.01□□□□□ -1.29
VPS50-206ENST00000443443 TRBV23-1A0A0A0MS06 115 aa7□□□□□ -1.29
VPS50-206ENST00000443443 MROH6A6NGR9 719 aa7□□□□□ -1.29
VPS50-206ENST00000443443 NKRFO15226 690 aaKnown RBP eCLIP7□□□□□ -1.29
VPS50-206ENST00000443443 CYP7B1O75881 506 aa7□□□□□ -1.29
VPS50-206ENST00000443443 TUSC3Q13454 348 aa7□□□□□ -1.29
VPS50-206ENST00000443443 CYP4F22Q6NT55 531 aa7□□□□□ -1.29
VPS50-206ENST00000443443 ZBTB38Q8NAP3 1195 aaPredicted RBP7□□□□□ -1.29
VPS50-206ENST00000443443 PUM2Q8TB72 1066 aaKnown RBP eCLIP7□□□□□ -1.29
VPS50-206ENST00000443443 TMEM209Q96SK2 561 aa7□□□□□ -1.29
VPS50-206ENST00000443443 IPPKQ9H8X2 491 aa7□□□□□ -1.29
VPS50-206ENST00000443443 RBPJLQ9UBG7 517 aa7□□□□□ -1.29
VPS50-206ENST00000443443 DSEQ9UL01 958 aa7□□□□□ -1.29
VPS50-206ENST00000443443 ASXL2Q76L83 1435 aa7□□□□□ -1.29
VPS50-206ENST00000443443 DIAPH1O60610 1272 aaKnown RBP6.99□□□□□ -1.29
VPS50-206ENST00000443443 LTFP02788 710 aa6.99□□□□□ -1.29
VPS50-206ENST00000443443 CDK11BP21127 795 aaKnown RBP6.99□□□□□ -1.29
VPS50-206ENST00000443443 FAM26FQ5R3K3 315 aa6.99□□□□□ -1.29
VPS50-206ENST00000443443 PRR31Q5SQ13 230 aa6.99□□□□□ -1.29
VPS50-206ENST00000443443 BORAQ6PGQ7 559 aa6.99□□□□□ -1.29
VPS50-206ENST00000443443 MTDHQ86UE4 582 aaKnown RBP6.99□□□□□ -1.29
VPS50-206ENST00000443443 LCORQ96JN0 433 aaPredicted RBP6.99□□□□□ -1.29
VPS50-206ENST00000443443 C8orf37Q96NL8 207 aa6.99□□□□□ -1.29
VPS50-206ENST00000443443 TMEM168Q9H0V1 697 aa6.99□□□□□ -1.29
VPS50-206ENST00000443443 CDK11AQ9UQ88 783 aaPredicted RBP6.99□□□□□ -1.29
VPS50-206ENST00000443443 KDM2BQ8NHM5 1336 aa6.99□□□□□ -1.29
VPS50-206ENST00000443443 AQP7O14520 342 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 ADCY3O60266 1144 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 MLLT6P55198 1093 aaPredicted RBP6.98□□□□□ -1.29
VPS50-206ENST00000443443 PHF19Q5T6S3 580 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 FOXB2Q5VYV0 432 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 VASNQ6EMK4 673 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 TRMT10BQ6PF06 316 aaKnown RBP6.98□□□□□ -1.29
VPS50-206ENST00000443443 LGI4Q8N135 537 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 PTPRN2Q92932 1015 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 INVSQ9Y283 1065 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 PCDHA8Q9Y5H6 950 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 ZNF536O15090 1300 aa6.98□□□□□ -1.29
VPS50-206ENST00000443443 K7ESM1 405 aa6.97□□□□□ -1.29
VPS50-206ENST00000443443 FAM153BP0C7A2 387 aa6.97□□□□□ -1.29
VPS50-206ENST00000443443 SUMO1P63165 101 aaKnown RBP6.97□□□□□ -1.29
VPS50-206ENST00000443443 GUCY1A3Q02108 690 aa6.97□□□□□ -1.29
VPS50-206ENST00000443443 PAK1Q13153 545 aa6.97□□□□□ -1.29
VPS50-206ENST00000443443 PAN2Q504Q3 1202 aaKnown RBP6.97□□□□□ -1.29
VPS50-206ENST00000443443 EP400NLQ6ZTU2 488 aa6.97□□□□□ -1.29
VPS50-206ENST00000443443 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.97□□□□□ -1.29
VPS50-206ENST00000443443 UHMK1Q8TAS1 419 aaKnown RBP6.97□□□□□ -1.29
VPS50-206ENST00000443443 CATSPERZQ9NTU4 200 aa6.97□□□□□ -1.29
VPS50-206ENST00000443443 FTSJ1Q9UET6 329 aa6.97□□□□□ -1.29
VPS50-206ENST00000443443 WASF3Q9UPY6 502 aa6.97□□□□□ -1.29
VPS50-206ENST00000443443 ZDHHC9Q9Y397 364 aa6.97□□□□□ -1.29
VPS50-206ENST00000443443 CKMP06732 381 aa6.96□□□□□ -1.3
VPS50-206ENST00000443443 SRGAP2CP0DJJ0 459 aa6.96□□□□□ -1.3
VPS50-206ENST00000443443 ZNF28P17035 718 aa6.96□□□□□ -1.3
VPS50-206ENST00000443443 RBL2Q08999 1139 aa6.96□□□□□ -1.3
VPS50-206ENST00000443443 MAMDC2Q7Z304 686 aaPredicted RBP6.96□□□□□ -1.3
VPS50-206ENST00000443443 TTLL11Q8NHH1 800 aa6.96□□□□□ -1.3
VPS50-206ENST00000443443 PMFBP1Q8TBY8 1022 aa6.96□□□□□ -1.3
VPS50-206ENST00000443443 DEPDC7Q96QD5 511 aa6.96□□□□□ -1.3
VPS50-206ENST00000443443 WRNIP1Q96S55 665 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms