RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 KIF17Q9P2E2 1029 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 WDR7Q9Y4E6 1490 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 CARSP49589 748 aaKnown RBP16.91■□□□□ 0.3
CDH23-207ENST00000442677 ADCY2Q08462 1091 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 LPIN2Q92539 896 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 HOOK2Q96ED9 719 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 PCIF1Q9H4Z3 704 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
CDH23-207ENST00000442677 GNPATO15228 680 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 IL2RBP14784 551 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 PAGR1Q9BTK6 254 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 TRIM55Q9BYV6 548 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 HACD3Q9P035 362 aa16.91■□□□□ 0.3
CDH23-207ENST00000442677 EIF4A3P38919 411 aaKnown RBP16.9■□□□□ 0.3
CDH23-207ENST00000442677 NT5C1BQ96P26 610 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 L3MBTL1Q9Y468 752 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 E9PMD0 336 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 PFKFB2O60825 505 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 ARMC2Q8NEN0 867 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 IQANK1A0A1B0GTG1 560 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 PARP9Q8IXQ6 854 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 ICA1LQ8NDH6 482 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 GGCXP38435 758 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 MDM2Q00987 491 aaPredicted RBP16.9■□□□□ 0.3
CDH23-207ENST00000442677 SMCR8Q8TEV9 937 aaPredicted RBP16.9■□□□□ 0.3
CDH23-207ENST00000442677 SPARCL1Q14515 664 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 LPXNO60711 386 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 RAD23BP54727 409 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 AP2B1P63010 937 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 PAWRQ96IZ0 340 aaKnown RBP16.9■□□□□ 0.3
CDH23-207ENST00000442677 EYA1Q99502 592 aa16.9■□□□□ 0.3
CDH23-207ENST00000442677 ZBTB24O43167 697 aaPredicted RBP16.89■□□□□ 0.29
CDH23-207ENST00000442677 SRGAP2O75044 1071 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 KCNA1Q09470 495 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 POLA2Q14181 598 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 HSPH1Q92598 858 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 TTC1Q99614 292 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 ADPGKQ9BRR6 497 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 TMEM60Q9H2L4 133 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 UBE2TQ9NPD8 197 aaPredicted RBP16.89■□□□□ 0.29
CDH23-207ENST00000442677 ADAM21Q9UKJ8 722 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.29
CDH23-207ENST00000442677 ODR4Q5SWX8 454 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 CAPRIN2Q6IMN6 1127 aaKnown RBP16.89■□□□□ 0.29
CDH23-207ENST00000442677 CNBD1Q8NA66 436 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 ZNF280CQ8ND82 737 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 ZSWIM6Q9HCJ5 1215 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 SAMSN1Q9NSI8 373 aaKnown RBP16.89■□□□□ 0.29
CDH23-207ENST00000442677 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 DCTN4Q9UJW0 460 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 DPP8Q6V1X1 898 aaPredicted RBP16.89■□□□□ 0.29
CDH23-207ENST00000442677 SATB2Q9UPW6 733 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 USP19O94966 1318 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 FAM149B1Q96BN6 582 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 TEKT3Q9BXF9 490 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 USP17L12C9JPN9 530 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 USP17L21D6R901 530 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 PYGBP11216 843 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 ALAS1P13196 640 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 SCG2P13521 617 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 NSUN2Q08J23 767 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDH23-207ENST00000442677 FANCBQ8NB91 859 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 GSDMAQ96QA5 445 aa16.89■□□□□ 0.29
CDH23-207ENST00000442677 TLR3O15455 904 aaKnown RBP16.88■□□□□ 0.29
CDH23-207ENST00000442677 EIF3BP55884 814 aaKnown RBP16.88■□□□□ 0.29
CDH23-207ENST00000442677 TRIM60Q495X7 471 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 FAM161BQ96MY7 647 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 PSMC2P35998 433 aaKnown RBP16.88■□□□□ 0.29
CDH23-207ENST00000442677 KPNA2P52292 529 aaKnown RBP16.88■□□□□ 0.29
CDH23-207ENST00000442677 EPHB1P54762 984 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 MYO1EQ12965 1108 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 NBPF20Q3BBV1 942 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 EPM2AIP1Q7L775 607 aaPredicted RBP16.88■□□□□ 0.29
CDH23-207ENST00000442677 ADCY9O60503 1353 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 PYGLP06737 847 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 XPAP23025 273 aaPredicted RBP16.88■□□□□ 0.29
CDH23-207ENST00000442677 ADA2Q9NZK5 511 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 FAM8A1Q9UBU6 413 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 SEC24DO94855 1032 aaPredicted RBP16.88■□□□□ 0.29
CDH23-207ENST00000442677 TRPC1P48995 793 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 KLC3Q6P597 504 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 P2RX5Q93086 422 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 SH3GL3Q99963 347 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 NEUROG2Q9H2A3 272 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 ATG3Q9NT62 314 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 ARPP21Q9UBL0 812 aaPredicted RBP16.88■□□□□ 0.29
CDH23-207ENST00000442677 MRPL28Q13084 256 aaKnown RBP16.88■□□□□ 0.29
CDH23-207ENST00000442677 ZWILCHQ9H900 591 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 SAYSD1Q9NPB0 183 aa16.88■□□□□ 0.29
CDH23-207ENST00000442677 NDUFA10O95299 355 aa16.87■□□□□ 0.29
CDH23-207ENST00000442677 KRT4P19013 534 aa16.87■□□□□ 0.29
CDH23-207ENST00000442677 ERFP50548 548 aa16.87■□□□□ 0.29
CDH23-207ENST00000442677 CYP27A1Q02318 531 aa16.87■□□□□ 0.29
CDH23-207ENST00000442677 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDH23-207ENST00000442677 CENPUQ71F23 418 aa16.87■□□□□ 0.29
CDH23-207ENST00000442677 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
CDH23-207ENST00000442677 CCPG1Q9ULG6 757 aa16.87■□□□□ 0.29
CDH23-207ENST00000442677 APOBEC2Q9Y235 224 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms