RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ARHGAP45Q92619 1136 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CASP10Q92851 521 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 RPGRIP1Q96KN7 1286 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 NAP1L3Q99457 506 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 SIKE1Q9BRV8 207 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 XPO4Q9C0E2 1151 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 DLGAP2Q9P1A6 1054 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CDC23Q9UJX2 597 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 PNMA3Q9UL41 463 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 INTUQ9ULD6 942 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 BARX2Q9UMQ3 279 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 STK38LQ9Y2H1 464 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 PPP2R2CQ9Y2T4 447 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SH3GLB1Q9Y371 365 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SLIT2O94813 1529 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SYNRGQ9UMZ2 1314 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 NRKQ7Z2Y5 1582 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 MYOM2P54296 1465 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SMIM23A6NLE4 172 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SPECC1L-ADORA2AF8WAN1 911 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 EIF3FO00303 357 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 OPLAHO14841 1288 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ARHGAP6O43182 974 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 AKR1B10O60218 316 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 RASSF9O75901 435 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ATP6V1G2O95670 118 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SSTR3P32745 418 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 SERPINB4P48594 390 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 BLMHQ13867 455 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 MTFR1Q15390 333 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CCDC6Q16204 474 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 MUM1Q2TAK8 710 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 FKBP15Q5T1M5 1219 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 NAA35Q5VZE5 725 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 NUGGCQ68CJ6 796 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SPECC1LQ69YQ0 1117 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 KANK3Q6NY19 840 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 TLDC1Q6P9B6 456 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 APLFQ8IW19 511 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 TEX9Q8N6V9 391 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 RETREG2Q8NC44 543 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ERMNQ8TAM6 284 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CCDC110Q8TBZ0 833 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 MAGEC3Q8TD91 643 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ZNF473Q8WTR7 871 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 HPS3Q969F9 1004 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ZFRQ96KR1 1074 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 AGAP3Q96P47 875 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 PNKPQ96T60 521 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 DUSP9Q99956 384 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 CLSTN2Q9H4D0 955 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SYNCQ9H7C4 482 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 WBP1LQ9NX94 342 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 C6orf203Q9P0P8 240 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 TMCO1Q9UM00 188 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CEP131Q9UPN4 1083 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 HPS5Q9UPZ3 1129 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 PPME1Q9Y570 386 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 NR2E3Q9Y5X4 410 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CSADQ9Y600 493 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CREBBPQ92793 2442 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 PKD1L2Q7Z442 2459 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CARMIL3Q8ND23 1372 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 KIAA1210Q9ULL0 1709 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 ZFYVE9O95405 1425 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CDK12Q9NYV4 1490 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 BRWD1Q9NSI6 2320 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 GNAT3A8MTJ3 354 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 LIN7AO14910 233 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 TIMM44O43615 452 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 USO1O60763 962 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 CUTAO60888 179 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SLURP2P0DP57 97 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 MYBP10242 640 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 PDCP20941 246 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CHMLP26374 656 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 SMARCA1P28370 1054 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 GBP1P32455 592 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 TRPC1P48995 793 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 TMED10P49755 219 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 ITGA7Q13683 1181 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 PDE1CQ14123 709 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 IQCEQ6IPM2 695 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CCSAPQ6IQ19 270 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 SARM1Q6SZW1 724 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 NUDT18Q6ZVK8 323 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 RSRC2Q7L4I2 434 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 MAATS1Q7Z4T9 603 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CTU1Q7Z7A3 348 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 CCDC83Q8IWF9 413 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CLASRPQ8N2M8 674 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 SLC43A3Q8NBI5 491 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 LEO1Q8WVC0 666 aaPredicted RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 WDR60Q8WVS4 1066 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 HVCN1Q96D96 273 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 NAF1Q96HR8 494 aaKnown RBP3.04□□□□□ -1.92
LIG4-203ENST00000442234 EPSTI1Q96J88 318 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 C8orf76Q96K31 380 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 CTAGE1Q96RT6 745 aa3.04□□□□□ -1.92
LIG4-203ENST00000442234 WDR24Q96S15 920 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms