RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 SPDYE3A6NKU9 549 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 SPATA31C2B4DYI2 1134 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 PIK3CDO00329 1044 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 CXCL10P02778 98 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 SMIM10L2AP0DMW4 78 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 SMIM10L2BP0DMW5 78 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 RXRAP19793 462 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 THPOP40225 353 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 MRPS5P82675 430 aaKnown RBP13.54□□□□□ -0.24
TTC28-203ENST00000442232 SP4Q02446 784 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 ZNF618Q5T7W0 954 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
TTC28-203ENST00000442232 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 ARNTL2Q8WYA1 636 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 C16orf70Q9BSU1 422 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 PSTPIP2Q9H939 334 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 CERS4Q9HA82 394 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 PRDM6Q9NQX0 595 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 MICAL3Q7RTP6 2002 aa13.54□□□□□ -0.24
TTC28-203ENST00000442232 RSPH10B2B2RC85 870 aa13.53□□□□□ -0.24
TTC28-203ENST00000442232 NBNO60934 754 aa13.53□□□□□ -0.24
TTC28-203ENST00000442232 LGR5O75473 907 aa13.53□□□□□ -0.24
TTC28-203ENST00000442232 RSPH10BP0C881 870 aa13.53□□□□□ -0.24
TTC28-203ENST00000442232 MRPS9P82933 396 aaKnown RBP13.53□□□□□ -0.24
TTC28-203ENST00000442232 ZNF200P98182 395 aaPredicted RBP13.53□□□□□ -0.24
TTC28-203ENST00000442232 AAK1Q2M2I8 961 aa13.53□□□□□ -0.24
TTC28-203ENST00000442232 BMP2KLQ5H9B9 411 aa13.53□□□□□ -0.24
TTC28-203ENST00000442232 UTP14CQ5TAP6 766 aaKnown RBP13.53□□□□□ -0.24
TTC28-203ENST00000442232 SERINC5Q86VE9 423 aa13.53□□□□□ -0.24
TTC28-203ENST00000442232 SRBD1Q8N5C6 995 aaKnown RBP13.53□□□□□ -0.24
TTC28-203ENST00000442232 SENP7Q9BQF6 1050 aa13.53□□□□□ -0.24
TTC28-203ENST00000442232 RBM28Q9NW13 759 aaKnown RBP13.53□□□□□ -0.24
TTC28-203ENST00000442232 MEIS2O14770 477 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 CAND2O75155 1236 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 AMHP03971 560 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 DEFB103AP81534 67 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 TAP1Q03518 808 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 TRIM71Q2Q1W2 868 aaKnown RBP13.52□□□□□ -0.25
TTC28-203ENST00000442232 TMTC3Q6ZXV5 915 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 HEATR3Q7Z4Q2 680 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 CMTR1Q8N1G2 835 aaKnown RBP13.52□□□□□ -0.25
TTC28-203ENST00000442232 CCDC82Q8N4S0 544 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 FANCBQ8NB91 859 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 GPRASP2Q96D09 838 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 ASB2Q96Q27 587 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 GPR20Q99678 358 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 LRRC2Q9BYS8 371 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 SIP14410 1827 aa13.52□□□□□ -0.25
TTC28-203ENST00000442232 GJB5O95377 273 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 ARHGAP4P98171 946 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 FGD1P98174 961 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 SEMA3FQ13275 785 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 KRT32Q14532 448 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 NECTIN1Q15223 517 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 FAM117BQ6P1L5 589 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 SEPT8Q92599 483 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 WNT8BQ93098 351 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 NEK1Q96PY6 1258 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 RAD9AQ99638 391 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 CHD7Q9P2D1 2997 aa13.51□□□□□ -0.25
TTC28-203ENST00000442232 PRRC2BQ5JSZ5 2229 aaKnown RBP13.51□□□□□ -0.25
TTC28-203ENST00000442232 TRANK1O15050 2925 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 TTC28Q96AY4 2481 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 hCG_1642624A0A1W2PR95 340 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 TNFRSF10AO00220 468 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 RFXAPO00287 272 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 TREHO43280 583 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 CDC45O75419 566 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 CTSHP09668 335 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 NAPAP54920 295 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 MTMR1Q13613 665 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 GPNMBQ14956 572 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 UBE2SQ16763 222 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 PPP1R18Q6NYC8 613 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 RSPH3Q86UC2 560 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 TRIM50Q86XT4 487 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 MYOCDQ8IZQ8 938 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
TTC28-203ENST00000442232 SETD4Q9NVD3 440 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 NAP1L2Q9ULW6 460 aaPredicted RBP13.5□□□□□ -0.25
TTC28-203ENST00000442232 MTCH2Q9Y6C9 303 aa13.5□□□□□ -0.25
TTC28-203ENST00000442232 NRCAMQ92823 1304 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 hCG_1984214I3L0E3 225 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 ZBTB43O43298 467 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 POU3F3P20264 500 aaPredicted RBP13.49□□□□□ -0.25
TTC28-203ENST00000442232 HOXC8P31273 242 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 TCF7P36402 384 aaPredicted RBP13.49□□□□□ -0.25
TTC28-203ENST00000442232 HIC1Q14526 733 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 RTN1Q16799 776 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 TRAF7Q6Q0C0 670 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 APOA5Q6Q788 366 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 TMCO2Q7Z6W1 182 aaPredicted RBP13.49□□□□□ -0.25
TTC28-203ENST00000442232 TEX2Q8IWB9 1127 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 ZNF713Q8N859 430 aaPredicted RBP13.49□□□□□ -0.25
TTC28-203ENST00000442232 DBF4BQ8NFT6 615 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 ADAMTS19Q8TE59 1207 aa13.49□□□□□ -0.25
TTC28-203ENST00000442232 APBB2Q92870 758 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms